TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCCTATATACACCTAGTTTCTGAGCATCATTTGTTAAGTTGGACATCAT
TGGGAAGAGAGGCCCCGTGGTCTTGCAAACTTTATATGCCTCAGTACAGG
GGAAGGCAAGGACCAAGAAGTAGGAGTGGGTGGGGGAGGGTATGTTTTCT
TTCTTTTTTCTTTCTTCCTGTTGTTTTTTTCGGTTCTTTCTTTCTCCCTT
GTTCTTTTTTTGCTTTTTCTGTTCTTGCTACGGGCCCAGCTCTGTTTTTT
TTTTTTTTCTTTTTCTGTCCTTTTTTCGTCTCTCGTTTCTGTTTTTCGTG
TTTTCGTTTTTTTTTTTCGCTTTTTTTTGTTGTGTTTCGGTCTGTTCGTT
TTTTTGGTTACGTATCTTATCTTCTTCCCGCTTTTTTATTTCCGTTTTCT
TTTTCTCTTGTCTCTTCTCATGTTTCCTTCCTTTGTTTTTTTTCGTTTTT
TCAGTTTCTTTCTTGTCTTTTTCTTTATTCTTTTTCTTTCTGTTTTTCCT
TCTTGCCTTCTCGCTTTTCTTCTCTTTCGTCATCTTTCCTCTTTATCTTT
TGGTCCTCCTTACACTTCTTTCTTTCCTTTTCTTTTTTTCTCATTTTCCT
CGGCTTCTTTTTTTTTTATCGTCTCATACTTCGTCTTTCTTCCTTTTCTT
CCCTTTTCTCCGCGATTCCTTCTCTTTTTCCTTTCCTTCCGCGCTTTTTT
TCTTCTCCTCTTTTTTTCTTTTTCCTCCTTCTCTCGTTTTCTTTTTATTT
TCGTTTTCGTCTTGTTCTTATTTTTATTATACTTCGTTTATCTCCTCTCT
TTTTCTGCTCCTTTTTAATCTTTTTCCATCGCTCTTTTTTTTTCCTTTTT

TGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXAATCTTGACTGAGTATTAAAGGTGTTAGGACA
GGATAGCCTTTGAGGTCTGCCAGTTCTAAGATTAAACTTTAAGAAAGGAG
AATCCAATTATCAATTCGACTGCTAAACAGATGCACAAAGAGTTAGCAAA
TGAGGCTATTTGTAGATGACTTTGAGGTGGAATTCACAGATGGAGTGGGA
AGTCTACATTGTAACAGCAAATTTGTAATTTACAGTATAGGAATTGATCT
CAATGATTCTAAAACTAGAGAATTAGAGAGTAAAATGCACAGTTAGGACT
CGTTAATCTCTCTGGGAATTTCCAAAAAATAGATATCATATAATTACTGA
GAATAAATCTTAATTTGAGTATAGATTATCCTAATATGCATAGATTTATA
AAATTTTTTATAAAGCTCATGTTTCCAAGGAGTATTATATCTAATCAACA
GACTGTTGCTTTGCTTATGGGACAGACCAGTTTTATCTTTTTACTCAACA
TTCTTCAAAAGTTGTTTCATTAGGATGGTAGAATAGTCTTCTAAAGAGCA
TGTAAATGCTCACAGATATGTATCACCTAAAGAATGAGTTAAATTTTCCA
TTGGATGGCCATGCTCTTAACTTAATAAACTGGTTCTACTCCGGCCGAAT
CTTGGGTCCTGAACTACGGAGAAAAATCAGATGGAAAAAGGGTTGCTGCT
GGGGTTTGAAAACCTGAGCTCAAGCCN

Query= MSMg01no426_n03.g1 MSMg01no426_n03.g1 CHROMAT_FILE:
MSMg01no426_n03.g1 PHD_FILE: MSMg01no426_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:30 2005
         (493 letters)



>mm_chr4_30625307_30626199
          Length = 893

 Score =  915 bits (473), Expect = 0.0
 Identities = 488/493 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcttgactgagtattaaaggtgttaggacaggatagcctttgaggtctgccagttcta 60
           ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 575 aatctcgactgagtattaaaggtgttaggacaggatagcctttgagttctgccagttcta 516

                                                                       
Query: 61  agattaaactttaagaaaggagaatccaattatcaattcgactgctaaacagatgcacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 agattaaactttaagaaaggagaatccaattatcaattcgactgctaaacagatgcacaa 456

                                                                       
Query: 121 agagttagcaaatgaggctatttgtagatgactttgaggtggaattcacagatggagtgg 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 455 agagttagcaaatgaggctatttgtagatgactttgaggtggaattcacagatggattgg 396

                                                                       
Query: 181 gaagtctacattgtaacagcaaatttgtaatttacagtataggaattgatctcaatgatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gaagtctacattgtaacagcaaatttgtaatttacagtataggaattgatctcaatgatt 336

                                                                       
Query: 241 ctaaaactagagaattagagagtaaaatgcacagttaggactcgttaatctctctgggaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctaaaactagagaattagagagtaaaatgcacagttaggactcgttaatctctctgggaa 276

                                                                       
Query: 301 tttccaaaaaatagatatcatataattactgagaataaatcttaatttgagtatagatta 360
            |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gttccaaaaaataaatatcatataattactgagaataaatcttaatttgagtatagatta 216

                                                                       
Query: 361 tcctaatatgcatagatttataaaattttttataaagctcatgtttccaaggagtattat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tcctaatatgcatagatttataaaattttttataaagctcatgtttccaaggagtattat 156

                                                                       
Query: 421 atctaatcaacagactgttgctttgcttatgggacagaccagttttatctttttactcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 atctaatcaacagactgttgctttgcttatgggacagaccagttttatctttttactcaa 96

                        
Query: 481 cattcttcaaaag 493
           |||||||||||||
Sbjct: 95  cattcttcaaaag 83


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space:   426489
Effective search space used:   426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)