NCCTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCAGAGGATCCG
CGGAATTCCTTCTGTGTCCTCCCTGAATGATGAACTGCAAGCTATGAGAT
GAAATAAACTCTTTCCTTCCCATGTTGTTTTTGGTCATGATATTTTATCA
CAGCAATTAAAAACCCTACCTAAGACATACTGCCTGATATAGACACTATG
TGTGGTGGTTTGAATAAAAGTGGCCCCATGTTTGGTTTGAACGAAAATGG
CCCCCATAGGCTCATAGGTAGTGGCACCATTAGGAAGTGTGGCCTTGTTG
GTGGAAGTGTGTCAATGGGGTTGGACTTTGAAGTCTCAAATGCTCAAGCC
AGGCCTAGTGTGACATTCTCTTCCTGCTGCCTGCAGATCCAGATATAGAA
CTCTCAGCTACTTCTCCAGCACTTTGTCTTTGGCATGCCTCCGCGCTTCC
TGCCATGATAATAATGGACTAAATCTCCCAACTATTATCCCGCCCCCATG
AAATGGTTTCCCTTTGAAAGAGTAACCATGGGCCTTGGCGTTTCCTTCTC
CTCCATACAAAACCCCATAAACACAAGTCGTCACTCTTGAAAAACTTAGG
TAAATTTTTTTCGCAATATCAATCATATATCTTTAGCTTCCGATTCTTGT
ACTCTACTTTCTTTCTCTCCTTCTTATCATTATTTTTCTAATTTCTCTTA
CTCCCCCTTTCCTCTACCTATACTATCACCTACATCCTCTTACCTCTTTT
CTCTCCTTTCCGATCTGATACTGATTACTCTCTTCTTGCCTATCCCGTTC
CTAATCTCCTCAACTTCCAC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCACTGGTAGCTGGTTGATAGGGCC
CAGACAGGAATACCACTTACTGATCAGTCTTAAGTACAGCAAAGTTATTT
CTTGCCTTTCTGGTTAAAGGGAATATAGAAATGTGAAATGGGGAGGGAGG
AAACCTCAGAGAAATGGGAGCTTTGGAAACCAAACCAAGACCTGCGCACC
CTGTTCATTTTCAGGACAGGTCCATCACATGCACACACTGTTTATCACCA
GAGACGGGGTCCACCATTGGAGGATGTTTTTGTGCAGTGTGCAAAGACTG
CCCTTGTGTTATTCAGATGCTCATTTCTGAACCAGCAGAGATCTGATTTC
AGGCCATATGTGGTATTGTTAATCATCTCCTGCCTTAGGATTTTGTAAAC
ATTGTTCTCCACCTTATGAAAGCCGATGGCCTATAGCAAAAGTGGAATAG
TTAGGTGGGACTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTCT
CTGGNAATCCTTACTCATAGGAAGAAGCTAGCTGGTAATGTATTAGAGGT
AATTTATCCCTCCTTGTGTTTGAATTGAAATTAATCATAACTTGTTTTAA
TGATATTATGACTCTCTTAATAACTTTTTTTTATTTATATGTTTATTATC
TTTATTTTCTTTCTTTCTCCTTTTCGGATTTTTTCTTATCTTTGCACATT
TTTTTTCTCTTTTTCACT

Query= MSMg01no426_n22.g1 MSMg01no426_n22.g1 CHROMAT_FILE:
MSMg01no426_n22.g1 PHD_FILE: MSMg01no426_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:34 2005
         (432 letters)



>mm_chr4_86205445_86206276
          Length = 832

 Score =  810 bits (419), Expect = 0.0
 Identities = 430/435 (98%), Gaps = 3/435 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cactggtagctggttgatagggcccagacaggaataccacttactgatcagtcttaagta 60
           |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 cactggtacctggttgatagggcccatacaggaataccacttactgatcagtcttaagta 260

                                                                       
Query: 61  cagcaaagttatttcttgcctttctggttaaagggaatatagaaatgtgaaatggggagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcaaagttatttcttgcctttctggttaaagggaatatagaaatgtgaaatggggagg 320

                                                                       
Query: 121 gaggaaacctcagagaaatgggagctttggaaaccaaaccaagacctgcgcaccctgttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggaaacctcagagaaatgggagctttggaaaccaaaccaagacctgcgcaccctgttc 380

                                                                       
Query: 181 attttcaggacaggtccatcacatgcacacactgtttatcaccagagacggggtccacca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttcaggacaggtccatcacatgcacacactgtttatcaccagagacggggtccacca 440

                                                                       
Query: 241 ttggaggatgtttttgtgcagtgtgcaaagactgcccttgtgttattcagatgctcattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttggaggatgtttttgtgcagtgtgcaaagactgcccttgtgttattcagatgctcattt 500

                                                                       
Query: 301 ctgaaccagcagagatctgatttcaggccatatgtggtattgttaatcatctcctgcctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgaaccagcagagatctgatttcaggccatatgtggtattgttaatcatctcctgcctt 560

                                                                       
Query: 361 aggattttgtaaacattgttctcca---ccttatgaaagccgatggcctatagcaaaagt 417
           |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct: 561 aggattttgtaaacattgttctccatcaccttatgaaagccgatggcctatagcaaaagt 620

                          
Query: 418 ggaatagttaggtgg 432
           |||||||||||||||
Sbjct: 621 ggaatagttaggtgg 635


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)