NNNNTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTTTGTTTATCTCTGAGCCCCATTTTCTAATGGGCTTA
TTTGATTTTCTAGAGTCCACCTTCTTGAGTTCTTTATATATTTTGGATAT
TAGTCCTCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTG
GTGGCCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTCCAGAAGCTTTGC
AGTTTCATGAGGTCCCATTTGTCACTTCTTGGTCTTACAGCACAAGCCAT
TGCTGTTCTATTCAGGAATTTTTTCCCCTGTGTTTTTATCTTCAAGGCTT
TTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAG
TTCCTTGATCCACTTAGATTTGACCTTAGTACAAAGAGATAGGAATGGAT
CAATTCACATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTG
TTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTGGAA
GATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTAT
TCCATTTGTCTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTATT
CACAATTGCTCTGTAGAAAAGTTTTAGTTCTGTGTTGTGGATTCCACCAA
AGGTCTTTTTATCTTTGAAAAAAATATTCCTCATTCTAAGGTTTTTGTTA
TTCCGCTG

NNNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTACCTAGGAAAACTTT
GTTTCTAAAATGAAGGGAGAATGGAACATTTCCCTAGATAAACAGAAGCT
AAAGGAATTCTTACCACTAGCTTTATCAGAAATTCTAAAAGGAAGAATTC
AACTTGAAATGTAGGGTATAGCACAGGGGCACGAAAGGATATAATAGTAT
AAAGATGTTTTTAGAGATATCTATATAGATAATAAATGTTCTGTAATATA
AACATGAGCATATATACACAAATCACTGTTAATTCTGTAATTGCAGTTCA
ATGTCAAATGGAGAAAGGCAAGTATAAACATAAAGTGTGATAATAGATGC
ACAATATGCAAGATAGAATTTTTGACACCATTAATCAGTTTTTAATTGTT
GAAAGTATCTAATCGGAAAAAGAAGAGTGAAGAATTTTTCTATGTGAACA
TACTAATGTTGTTACCTTAAAATATGTTTTTATAACTGTAAGTTTTTTTT
CAAGAACCCCCCAATTACCAAAAGAATATACTTTTAAAAGAAACCCAAGG
GAAATGAGGGGGATGACTGGTGGAAAGGCTATATGGGTGAAAAGATTTGT
TGCCAAACCGGGAAAACGGTGGATTCCGAAAATCCTCTGGGGGGGGGAGA
ACCACACTCCACACCTTCTGGGGCTCCCCTAGGGCCGGAAACACAAGAAC
TTTCCAACAAGGCTGGGT

Query= MSMg01no427_i21.g1 MSMg01no427_i21.g1 CHROMAT_FILE:
MSMg01no427_i21.g1 PHD_FILE: MSMg01no427_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:27 2005
         (428 letters)



>mm_chr4_76290104_76290931
          Length = 828

 Score =  719 bits (372), Expect = 0.0
 Identities = 414/428 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   attacctaggaaaactttgtttctaaaatgaagggagaatggaacatttccctagataaa 60
           ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 201 attacctaggaaaactttgtttctaaaatgaggggagaatgaaacatttccctagataaa 260

                                                                       
Query: 61  cagaagctaaaggaattcttaccactagctttatcagaaattctaaaaggaagaattcaa 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 261 cagaagctaaaggaattctcaccactagctttatcagaaattctaaaagaaaggattcaa 320

                                                                       
Query: 121 cttgaaatgtagggtatagcacaggggcacgaaaggatataatagtataaagatgttttt 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 cttgaaatgtagggtatagcacagggacacgaaaggatataatagtataaagatgttttt 380

                                                                       
Query: 181 agagatatctatatagataataaatgttctgtaatataaacatgagcatatatacacaaa 240
           |||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||
Sbjct: 381 agagatatctatatagataataaaagttctgtaatataaaaacgagcatatatacacaaa 440

                                                                       
Query: 241 tcactgttaattctgtaattgcagttcaatgtcaaatggagaaaggcaagtataaacata 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 tcactgttaattcagtaattgcagttcaatgtcaaatggagaaaggcaaatataaacata 500

                                                                       
Query: 301 aagtgtgataatagatgcacaatatgcaagatagaatttttgacaccattaatcagtttt 360
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtatgataatagatgcacaatatgcaagatagaatttttgacaccattaatcagtttt 560

                                                                       
Query: 361 taattgttgaaagtatctaatcggaaaaagaagagtgaagaatttttctatgtgaacata 420
           ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taattattgaaagtatctaattggaaaaagaagagtgaagaatttttctatgtgaacata 620

                   
Query: 421 ctaatgtt 428
           ||||||||
Sbjct: 621 ctaatgtt 628


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space:   343161
Effective search space used:   343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)