NNCATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCG
CGGAATTCTTTTTTTATTTCCTTATAAGGTATTTTTTTCATTTACATTTC
CAATGCTATCCCAAAAGTCCCCCATACCCTCCCCCCCACTCCCCTATCCA
CCTACTCCCACTTTTTGGTCCTGGCATTCCCCTGTACTGGGGCATATAAA
GTTTGCAAGTCCAATGGGCCTCTCTTTCCACTGATGGATGACTAGGCCAT
CTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGT
TCATAATGTTGTTCCACCTATAGGGTTGCATTATCCCTTTAGCTCCTTGG
CTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCT
GACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCAGGCCTAGTCTCACA
AGAGACAGCTCTATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCA
ATGGTGTCAGTGTTTGGAAGCTGATTATGGGATGGATCCCCGGATATGGC
AGTCTTATGTGTCAGAAATGTCACTTCCTGCTACACTCCCCATTCATTCT
TCCCTCCTTAAATTCTCTTTCTTTTCCCCTCTGTGGAAGCCGGGTTTTCT
GATATACTGTCCCATGAACCGCACAGGTTGGTTTCAAACCTTCCCTAGTG
AACAGGTGAATCCTTGAACTCTTGAACCTCTGAATTCAACCCTCCTTTTT
TTGTATGTTAACATTCTCAAAAN

NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAGGAATTTAAAATGCAAC
TCAACTTGATAGATTCCTAAGGGTTATACTTAGTGAGAATTGAAAGAAGA
AACCAGACCCAAACACAGACCAGAACTTCCCTGGGTACTATGGAAACTCC
GCCTTTTTAGACTGTAGGAAGAGTAATGTCAGATATGCCACTGTTGTATG
GGTTAGAACAACACGTGTAAGCTCAAATGTGCCATGCTGACCCTAAATAA
TTGGAGGAAGTAGGTTTTCTACCATCTTTTCCCTCTAAATCTTGTCATGG
GTGAGCATTAAGATTTAATCTGCTTTACTTAGCATTCAGAAAAAGAAGTA
AAATTCTTACTTGAGAAGAAAGCCTTCGTGACAGCTGTCACCAATGTCAT
CATCATTGAGCACTGTATCAGCTATCTAAAATGCACAATATAAAAATTAG
TCTGTTTACAGTGTTGGGAGAACTCTTAATAAGTGTGCCGAAGTCTAGAG
CCAGCACGAGCCAGCCCTCTCACGAGCATNCAGGCGATCTATAAAGTGAT
GCTGTCTATGCACTTTTCAGAAGAACAAGGGGAATTGGCCAGGAAGAGTA
AAGGGCACTTTTTAATAATTTACCCCTCTTAGCTATCCGAAATAGGAGAC
TGAGCTTAATGACAATCCGCCTTTTGAACATTGTCTAAAGAAATTTTTCC
CCGAAAAAGGGTGG

Query= MSMg01no427_j10.g1 MSMg01no427_j10.g1 CHROMAT_FILE:
MSMg01no427_j10.g1 PHD_FILE: MSMg01no427_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:30 2005
         (497 letters)



>mm_chr4_35159726_35160624
          Length = 899

 Score =  907 bits (469), Expect = 0.0
 Identities = 491/499 (98%), Gaps = 2/499 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaggaatttaaaatgcaactcaacttgatagattcctaagggttatacttagtgagaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaggaatttaaaatgcaactcaacttgatagattcctaagggttatacttagtgagaat 260

                                                                       
Query: 61  tgaaagaagaaaccagacccaaacacagaccagaacttccctgggtactatggaaactcc 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 261 tgaaagaagaaaccagacccaaacacagaccagaacttccctgggtactacggaaactct 320

                                                                       
Query: 121 gcctttttagactgtaggaagagtaatgtcagatatgccactgttgtatgggttagaaca 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gcctttttagactgtgggaagagtaatgtcagatatgccactgttgtatgggtgagaaca 380

                                                                       
Query: 181 acacgtgtaagctcaaatgtgccatgctgaccctaaataattggaggaagtaggttttct 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 acacgtgtaagctcaaatgtgccatgttgaccctaaataattggaggaagtaggttttct 440

                                                                       
Query: 241 accatcttttccctctaaatcttgtcatgggtgagcattaagattt--aatctgctttac 298
           |||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 441 accatcttttccctgtaaatcttgtcatgggtgagcattaagatttttaatctgctttac 500

                                                                       
Query: 299 ttagcattcagaaaaagaagtaaaattcttacttgagaagaaagccttcgtgacagctgt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttagcattcagaaaaagaagtaaaattcttacttgagaagaaagccttcgtgacagctgt 560

                                                                       
Query: 359 caccaatgtcatcatcattgagcactgtatcagctatctaaaatgcacaatataaaaatt 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caccaatgtcatcatcattgagcactgtatcagctatctaaaatgcacaatataaaaatt 620

                                                                       
Query: 419 agtctgtttacagtgttgggagaactcttaataagtgtgccgaagtctagagccagcacg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtctgtttacagtgttgggagaactcttaataagtgtgccgaagtctagagccagcacg 680

                              
Query: 479 agccagccctctcacgagc 497
           |||||||||||||||||||
Sbjct: 681 agccagccctctcacgagc 699


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 899
Length adjustment: 10
Effective length of query: 487
Effective length of database: 889
Effective search space:   432943
Effective search space used:   432943
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)