Query= MSMg01no429_j12.b1 MSMg01no429_j12.b1 CHROMAT_FILE:
MSMg01no429_j12.b1 PHD_FILE: MSMg01no429_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:08 2005
(268 letters)
>mm_chr4_63253173_63253840
Length = 668
Score = 491 bits (254), Expect = e-143
Identities = 263/266 (98%), Gaps = 2/266 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcaat-tcgctgctaaacactgctctgcactaagataaggtctaaggttagtc 62
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ggaattctcaatat-gctgctaaacactgctctgcactaagataaggtctaaggttagtc 410
Query: 63 ccaggaggaaaaagagacacagaaacaagcataggaatataaaaacagtaactttcaaag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ccaggaggaaaaagagacacagaaacaagcataggaatataaaaacagtaactttcaaag 350
Query: 123 gtgataaaaagcaataaaaagaacacggttaaatctaaatgaataatacctgctgtgctc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gtgataaaaagcaataaaaagaacacggttaaatctaaatgaataatacctgctgtgctc 290
Query: 183 tcgaatacagagaactgtgccctggcgagaacagtctcataggcagagtgaagggcagcg 242
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tcaaatacagagaactgtgccctggcgagaacagtctcataggcagagtgaagggcagcg 230
Query: 243 tgggctttggttgcccagggaacagt 268
||||||||||||||||||||||||||
Sbjct: 229 tgggctttggttgcccagggaacagt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no429_j12.g1 MSMg01no429_j12.g1 CHROMAT_FILE:
MSMg01no429_j12.g1 PHD_FILE: MSMg01no429_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:08 2005
(347 letters)
>mm_chr4_63078061_63078807
Length = 747
Score = 609 bits (315), Expect = e-179
Identities = 338/346 (97%)
Strand = Plus / Plus
Query: 1 acttgggaaatggagagtaacagaatgctggcccagggctgatggcaggactccatcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgggaaatggagagtaacagaatgctggcccagggctgatggcaggactccatcatg 260
Query: 61 agttaagtacaagcaaggtgtctagtcgttactggctcccagcatggtctgtctacagag 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 agttaagtacaagcaaggtgtctagtcgttactggctcccagcatggtccgtctacagag 320
Query: 121 gtctgtttggtcttctcacacatgccagtttttccttggggcagggacatagtgttgagc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 gtctgtttggtcttctcacacatgccagtttttccttggggcggggacatagtgttgagc 380
Query: 181 atctgtgagtatggcctcgagtccctgcttgccctttcctgggctactttaggcttccta 240
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 381 atctgtgagtatggcctcgagtccctgcttgccctttcctgggttactttaggcttgcta 440
Query: 241 ggcttttcttgtctacctaacataaggtatcatttcagccacaagatggcagcagagccc 300
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcttttccaggctacctaacataaggtatcatttcagccacaagatggcagcagagccc 500
Query: 301 agctaacttgctggacagccagnacttcctccacaccctcactggg 346
|||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 agctaacttgctggacagccagcacttcctccacaccctcactggg 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
