Query= MSMg01no429_k23.b1 MSMg01no429_k23.b1 CHROMAT_FILE:
MSMg01no429_k23.b1 PHD_FILE: MSMg01no429_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:15 2005
(332 letters)
>mm_chr4_118895514_118896243
Length = 730
Score = 592 bits (306), Expect = e-173
Identities = 324/330 (98%), Gaps = 2/330 (0%)
Strand = Plus / Minus
Query: 3 ggaattcactctgtagatcaggctggccatgagctcatagagatccacctgcctctgtct 62
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ggaattcactctgtagaccaggctggccatgagctcatagagatccacctgcctctgtct 574
Query: 63 cctgagtgctaggattgatggtgtaagtcaccgcagcctggctgcagggccttatttcaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cctgagtgctaggattgatggtgtaagtcaccgcagcctggctgcagggccttatttcaa 514
Query: 123 agaagcaaagtctgctgggggaagaagctagccatagcatggtataaggacttcgtggag 182
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 513 agaagcaaagtctgctggggg-agaagctagccatagcatggtataagggcttcgtggag 455
Query: 183 gtatgtgtaggcactgagaatatgggaaggcttggaaggttctattctgtgtataggaag 242
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gt-cgtgtaggcactgagaatatgggaaggcttggaaggttctattctgtgtataggaag 396
Query: 243 cctgtctttggggaccagggagggttctttttggttgaaatgtattggatatgcctttta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cctgtctttggggaccagggagggttctttttggttgaaatgtattggatatgcctttta 336
Query: 303 acctcatcaaacaaaggaatcttggtcttt 332
||||||||| ||||||||||||||||||||
Sbjct: 335 acctcatcagacaaaggaatcttggtcttt 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 730
Length adjustment: 9
Effective length of query: 323
Effective length of database: 721
Effective search space: 232883
Effective search space used: 232883
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_k23.g1 MSMg01no429_k23.g1 CHROMAT_FILE:
MSMg01no429_k23.g1 PHD_FILE: MSMg01no429_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:15 2005
(424 letters)
>mm_chr4_118727076_118727899
Length = 824
Score = 793 bits (410), Expect = 0.0
Identities = 419/422 (99%)
Strand = Plus / Plus
Query: 1 actatgtaactcagcctagccttgaactccaaaaccattcctcctgcctcagcctccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actatgtaactcagcctagccttgaactccaaaaccattcctcctgcctcagcctccaag 260
Query: 61 tgctggggttgcaggcataaccccccacacccagctatgtgttttcttctcttctttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctggggttgcaggcataaccccccacacccagctatgtgttttcttctcttctttctc 320
Query: 121 ttgaatttctactgcttgctcagattctttctgttggccaatatatgtggtcaaattacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaatttctactgcttgctcagattctttctgttggccaatatatgtggtcaaattacc 380
Query: 181 ttggtaatcaaaaaacaaaagccaagcccctccgcctcaccttcctcccagtgtctactt 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggtaatcaaaaaaaaaaagccaagcccctccgcctcaccttcctcccagtgtctactt 440
Query: 241 gctactcatgtccactgatgctctcccccctcccccccaggagatctgtccccatgttct 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctgctcatgtccactgatgctctcccccctcccccccaggagatctgtccccatgttct 500
Query: 301 cagttccgcctctcatctttcagacaaaattcagcctctgccacacagcacagagctcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagttccgcctctcatctttcagacaaaattcagcctctgccacacagcacagagctcag 560
Query: 361 agcttttctttctctttgtttcttttgttggttgttttgagccagggtcttacactatgt 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 agcttttctttctctttgtttcttttgttgtttgttttgagccagggtcttacactatgt 620
Query: 421 ag 422
||
Sbjct: 621 ag 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
