GGGAGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTATATTGTCACAGCATGGTAACAAAGGGAATTGAGAA
ATCAGCTCTGTATTCATTCTGAAAAGCTCTCTGGGCAAAGTGTTCAGTGA
TGCAGGTGATTGCCTGTTAGTCAGCAAGCTAGACAAGGCCTCTGCGACTA
AGCTACAGCCCCAGCAGTGGGTATTCTGTAAGATACTGCCTGCGTAAATG
ACAGGTCAGCCATGTTGCAGTAATGTTGCTGGAGAGCAGGTCGAGGTGCA
TTTCAGCATCTTCATGTGTTTTCCTCATCAAAGGCTTGTGCACCATGACG
ACTGCTTGGATAGAACACTATATCCCCTTCTTACCAAGAAGCACTGGCTG
TGGACCAGAAAATGTTTTGTCTGTAAGATGTATACAGCTAGGTGAGTGAC
GCTTTTTTCCTTCTAAACACCCTGGTTTTCATAGTAATTTATTACTCTGG
AGGTCTTTACATTTATCCGTCACGGTTTTATCTCCTATAGTCATTGTTGC
CCCCCTTGTCATCCTGTTTACTTTCCCTCCTATTGCTCCTGCACACTCTT
TGCTTTTTTCTCCCTTTTTTCCCCGCTTTCTCCCATTTTTTCCTTCCCCT
TCTCCTTTTCCTTTCTTTTTTCTTCTTTTCCCCTTTTTTCACCTTTATCT
CCCGTTCCTTTCTTTTGTTACCTATTTTTCTCTCTTTCTTTTTTTCCCTT
TACCTCTCCCTTCCCTTCG

NAATATGTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGTTTGCTCAAATT
TCAGGGAAGGCCAGTCCCTGGCCCCAGCTTGGTGCCTGGTAACAGGTCTT
AAGCGAATATGTGAAAATGAGCAGTTTTGTGACAGGCAGCTACCTGTCTG
ACAGCCACTACCGCAGAGCCAGGGGTGCATATGGGAATCACTTAGAGGCA
CTGTCTAAGACTCACCGTTAGTGTGTTTGCTGGGGAGGGGAAAGAGCCCA
GACAGTCTTCAGGAACTCTGGCATCTCTAGTCAACTCAGAAGAAGAAAGG
GGAAAACTGGAAAGTGTCACATCATGGAAAGAATGTTTGACAGAGAGTTT
CAATTGTGCTCCTTGCTACAAAAAGGCCAAGCAAAAGGACTAAGAGCTGC
CCACTGTGCACGGCATCATTACTGACTTTAAAGAAATGTCTTTGGCCTAC
CCCATCCAGGGATCCATAACACTACCAGCCACCCCACGCAGACACTATTG
TAGATGCCAGCCAGATTTTGCTGACATGACCCTGACGTAATTGGTCTCTG
GCCAGGCCCACCCTGGATAATCACAATTGCTAGCCTCTACTCCTCTTTCG
TCGCCGCCCCTTGGTTTTTGATGATGAACTATCCCACCCCGCCACCTCCT
AATATCTTATATACTCTTTTTCTTTTGCGAATATTCTCCTTAAACG

Query= MSMg01no430_o05.b1 MSMg01no430_o05.b1 CHROMAT_FILE:
MSMg01no430_o05.b1 PHD_FILE: MSMg01no430_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:58 2005
         (363 letters)



>mm_chr4_83096653_83097415
          Length = 763

 Score =  694 bits (359), Expect = 0.0
 Identities = 362/363 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtaacaaagggaattgagaaatcagctctgtattcattctgaaaagctctctgggca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggtaacaaagggaattgagaaatcagctctgtattcattctgaaaagctctctgggca 260

                                                                       
Query: 61  aagtgttcagtgatgcaggtgattgcctgttagtcagcaagctagacaaggcctctgcga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtgttcagtgatgcaggtgattgcctgttagtcagcaagctagacaaggcctctgcga 320

                                                                       
Query: 121 ctaagctacagccccagcagtgggtattctgtaagatactgcctgcgtaaatgacaggtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaagctacagccccagcagtgggtattctgtaagatactgcctgcgtaaatgacaggtc 380

                                                                       
Query: 181 agccatgttgcagtaatgttgctggagagcaggtcgaggtgcatttcagcatcttcatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccatgttgcagtaatgttgctggagagcaggtcgaggtgcatttcagcatcttcatgt 440

                                                                       
Query: 241 gttttcctcatcaaaggcttgtgcaccatgacgactgcttggatagaacactatatcccc 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 gttttcctcatcaaaggcttgtgcaccatgacgactgcttggatagaacactgtatcccc 500

                                                                       
Query: 301 ttcttaccaagaagcactggctgtggaccagaaaatgttttgtctgtaagatgtatacag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcttaccaagaagcactggctgtggaccagaaaatgttttgtctgtaagatgtatacag 560

              
Query: 361 cta 363
           |||
Sbjct: 561 cta 563


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space:   266916
Effective search space used:   266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no430_o05.g1 MSMg01no430_o05.g1 CHROMAT_FILE:
MSMg01no430_o05.g1 PHD_FILE: MSMg01no430_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:58 2005
         (358 letters)



>mm_chr4_83279874_83280631
          Length = 758

 Score =  669 bits (346), Expect = 0.0
 Identities = 355/358 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtgtttgctcaaatttcagggaaggccagtccctggccccagcttggtgcctggtaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agtgtttgctcaaatttcagggaaggccagtccctggccccagcttggtgcctggtaaca 499

                                                                       
Query: 61  ggtcttaagcgaatatgtgaaaatgagcagttttgtgacaggcagctacctgtctgacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggtcttaagcgaatatgtgaaaatgagcagttttgtgacaggcagctacctgtctgacag 439

                                                                       
Query: 121 ccactaccgcagagccaggggtgcatatgggaatcacttagaggcactgtctaagactca 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 438 ccactaccgcagagccaggggtgcatatgggaatcacttagaggcgctgtctaagactca 379

                                                                       
Query: 181 ccgttagtgtgtttgctggggaggggaaagagcccagacagtcttcaggaactctggcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccgttagtgtgtttgctggggaggggaaagagcccagacagtcttcaggaactctggcat 319

                                                                       
Query: 241 ctctagtcaactcagaagaagaaaggggaaaactggaaagtgtcacatcatggaaagaat 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctctagccaactcagaagaagaaaggggaaaactggaaagtgtcacatcatggaaagaat 259

                                                                     
Query: 301 gtttgacagagagtttcaattgtgctccttgctacaaaaaggccaagcaaaaggacta 358
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gtttgacggagagtttcaattgtgctccttgctacaaaaaggccaagcaaaaggacta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space:   261401
Effective search space used:   261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)