Query= MSMg01no431_f13.b1 MSMg01no431_f13.b1 CHROMAT_FILE:
MSMg01no431_f13.b1 PHD_FILE: MSMg01no431_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:37 2005
(418 letters)
>mm_chr4_126907755_126908572
Length = 818
Score = 671 bits (347), Expect = 0.0
Identities = 394/419 (94%), Gaps = 19/419 (4%)
Strand = Plus / Plus
Query: 1 tacacagagaaactttgtctaaaaaaaaaaaaaaaaaacaacaacaacaacaaaaacaaa 60
|||||||||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 218 tacacagagaaactttgtctcaaaaaaaaaaaaaaaaa-aa----------aaaaacaaa 266
Query: 61 aacaaacaaacaaacaaacaaacccaaaccagggctggagagatggctcagtggttaaga 120
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aacaaacaaacaaa------aacccaaaccagggctggagagatggctcagtggttaaga 320
Query: 121 gcactgactgctcttccagaggtcct-gcgttcagtttccagcaaccacatggtggctca 179
|||||||||||||||||||||| ||| | ||||| |||||||||||||||||||||||||
Sbjct: 321 gcactgactgctcttccagagg-ccttgagttcaatttccagcaaccacatggtggctca 379
Query: 180 caaccatctgtaatgggatctgatgccctcttctggtgtgtctgaagatagctacagtgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaccatctgtaatgggatctgatgccctcttctggtgtgtctgaagatagctacagtgt 439
Query: 240 acttacatatataaaatatttaaataaatcttaaaaagcaaaaccaaacaaaaccaaaca 299
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acttacatatataaaataaataaataaatcttaaaaagcaaaaccaaacaaaaccaaaca 499
Query: 300 accatcaaaacaaccaaaacttacagcagggaaacacgttgagatggtacctcttcagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 accatcaaaacaaccaaaacttacagcagggaaacacgttgagatggtacctcttcagaa 559
Query: 360 atgtagttgttgggaaaacatatcgtgacccccggtgttggcaaacgctggtgcttaga 418
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 560 atgtagttgttgggaaaacatatcgtgacccccagtgttggcaaacgctggtgcttaga 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_f13.g1 MSMg01no431_f13.g1 CHROMAT_FILE:
MSMg01no431_f13.g1 PHD_FILE: MSMg01no431_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:37 2005
(436 letters)
>mm_chr4_127048007_127048842
Length = 836
Score = 806 bits (417), Expect = 0.0
Identities = 432/437 (98%), Gaps = 2/437 (0%)
Strand = Plus / Minus
Query: 1 acataagtaaaaaaatggcagagatgggatttgaacccagaccgtggggttggttacaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 622 acataagtaaaaaaatggcagagatgggatttgaacccagaccgtggggttggtcacaat 563
Query: 61 aaactcaccgggctcccaaaggtattttt-ttattttgccaccagggcagtttcttcctg 119
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 562 aaactcaccgggctcccaaaggtatttttgttattttgccaccagggcagtttcttcctg 503
Query: 120 ttaatctcctcaccatgcaccatgcaccatgcaccatgcaccatgcaccatgcaccaccc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttaatctcctcaccatgcaccatgcaccatgcaccatgcaccatgcaccatgcaccaccc 443
Query: 180 catcccactgccccatgaaaacattccactcctccaggctgcacccacagagctaagatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 catcccactgccccatgaaaacattccactcctccaggctgcacccacagagctaagatt 383
Query: 240 tgaacccagatccatgaaggtgcaggtctgccttcttattcctctctgggtgtgcactgt 299
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 382 tgaacccagatccatgaaggtgcaggtctgccttcttcttcctctctgggtgtgcactgt 323
Query: 300 gcaacaaatgcctacttaaccaacttgcatgtataaaaagtggcatttgctttctgaatt 359
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 322 gcaacaaatgcctacttaaccaacttgcacgtataaaaagtggcatttgctttctga-tt 264
Query: 360 gagcctctgccagtggccgtgtgtgtgtgtctgtgtgtgtctgtgtgtctgtgtctgtgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gagcctctgccagtggccgtgtgtgtgtgtctgtgtgtgtctgtgtgtctgtgtctgtgt 204
Query: 420 atatctgtgtgtgtgtc 436
|||||||||||||||||
Sbjct: 203 atatctgtgtgtgtgtc 187
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
