Query= MSMg01no431_f19.b1 MSMg01no431_f19.b1 CHROMAT_FILE:
MSMg01no431_f19.b1 PHD_FILE: MSMg01no431_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:38 2005
(432 letters)
>mm_chr4_92810734_92811564
Length = 831
Score = 783 bits (405), Expect = 0.0
Identities = 423/429 (98%), Gaps = 2/429 (0%)
Strand = Plus / Minus
Query: 5 gaattcccaaatcacagactcacagagagcttacaattatttgtatttctagcagaagtc 64
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 464 gaattcccaaatcacagaatcacagagagcttacaattatttgtatttctagcagacgtc 405
Query: 65 agttaggaatcagtttgattgtatggagttattcttaaagcttaatttcttctttagaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 agttaggaatcagtttgattgtatggagttattcttaaagcttaatttcttctttagaga 345
Query: 125 tggtgtccatagatgaacgtgcaaagctgcaaaccaagtggggcatcaatctgatatctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tggtgtccatagatgaacgtgcaaagctgcaaaccaagtggggcatcaatctgatatctg 285
Query: 185 cattatggcctttgtctactggctaaactgatgtctataaaaattaatcttgacactctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 cattatggcctttgtctactggctaaactgatgtctataaaaattaatcttgacactctt 225
Query: 245 ctttttttttttc-ttttttttatttggtttttcgagacagggtttctctgtatagtctt 303
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 c-ttttttttttctttttttttatttggtttttcgagacagggtttctctgtatagtctt 166
Query: 304 ggctgtcctggaactcactttgtagaccaggctggccttgaaatcagaaatctgcctgtc 363
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 165 ggctgtcctggaactcactttgtagaccaggctggccttgaactcagaaatctgcctgtc 106
Query: 364 tctccctcccaagtgctgggattaaaggcatgtaccactaccgcccggcatttgacactc 423
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 105 tctccctcccaagtgctgggattaaaggcatgcaccactaccgcccggcatttgacactc 46
Query: 424 ttcttaacc 432
|||||||||
Sbjct: 45 ttcttaacc 37
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 831
Length adjustment: 9
Effective length of query: 423
Effective length of database: 822
Effective search space: 347706
Effective search space used: 347706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_f19.g1 MSMg01no431_f19.g1 CHROMAT_FILE:
MSMg01no431_f19.g1 PHD_FILE: MSMg01no431_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:38 2005
(435 letters)
>mm_chr4_92636551_92637385
Length = 835
Score = 826 bits (427), Expect = 0.0
Identities = 433/435 (99%)
Strand = Plus / Plus
Query: 1 acgcagagatgcctcactcacttgttttaatgaagcatttttctctcatgcactgaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgcagagatgcctcactcacttgttttaatgaagcatttttctctcatgcactgaagga 260
Query: 61 tgccaagaacagattgcttttggacttagtttccatatgctcagtcttcaaagtaaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccaagaacagattgcttttggacttagtttccatatgctcagtcttcaaagtaaagac 320
Query: 121 aaaagctgttaactcagtttcagaaactgtgctagatggctcttgttttcaaacatcgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagctgttaactcagtttcagaaactgtgctagatggctcttgttttcaaacatcgtt 380
Query: 181 cttttcacagagaagataagaagaacctgaagtccagctgtggtttttttcagacacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttttcacagagaagataagaagaacctgaagtccagctgtggtttttttcagacacact 440
Query: 241 ctaactgaacagatattttagttgagagaagtgtttcttttgactcaattccttgaggag 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaactgaacagagattttagttgagagaagtgtttcttttgactcaattccttgaggag 500
Query: 301 caaatgggtattgactgtcaaaaatacagttgttcggatagtcaaggaggggctcttgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaatgggtattgactgtcaaaaatacagttgttcggatagtcaaggaggggctcttgcc 560
Query: 361 tttggaaccagacatatcatgatagaagctacatgttctataggtaatcagtagcatact 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgtaaccagacatatcatgatagaagctacatgttctataggtaatcagtagcatact 620
Query: 421 tgtagagtctgtatt 435
|||||||||||||||
Sbjct: 621 tgtagagtctgtatt 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
