Query= MSMg01no432_c05.b1 MSMg01no432_c05.b1 CHROMAT_FILE:
MSMg01no432_c05.b1 PHD_FILE: MSMg01no432_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:44 2005
(565 letters)
>mm_chr4_67429792_67430756
Length = 965
Score = 975 bits (504), Expect = 0.0
Identities = 537/548 (97%), Gaps = 4/548 (0%)
Strand = Plus / Plus
Query: 7 gaattcctaatcctgttc-tccattctgtctcactgactttctgacctccaccatatgga 65
|||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||
Sbjct: 207 gaattcctaatcctgttcgt-cattctgtctcactggctttctgacctccaccatatgga 265
Query: 66 catggcctcatctgctaactgaaatgacttttctgtcataataccgacttcaatttgtgg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 catggcctcatctgctaactgaaatgacttttctgtcataataccgacttcaatttgtgg 325
Query: 126 tctctgtcaggcatatcgtgttgaatcacccttgtctcaactctgtcaccacctacacgc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tctctgtcaggcatatcgtgttgaatcacccttgtctcaactctgtcaccacctacacgc 385
Query: 186 ataaatggcaatcagtctcaacaattgcatttagatgagaaatatgggatcataacagca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ataaatggcaatcagtctcaacaattgcatttagatgagaaatatgggatcataacagca 445
Query: 246 gccttattcatcagtgttaagattggagcctctatagttact-acttaaagcattcacat 304
|||||||||||||||||||||||||||||||||| ||||| | ||||||| |||||||||
Sbjct: 446 gccttattcatcagtgttaagattggagcctctacagtta-tgacttaaaacattcacat 504
Query: 305 aggacaatattatggagtacaggattggtgaacagtgagttctgaaataccttcttgaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aggacaatattatggagtacaggattggtgaacagtgagttctgaaataccttcttgaaa 564
Query: 365 tatgccaaaaatcacaacatattaaaaaagaatagttagaaaaataatagaagattatga 424
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 565 aatgccaaaaatcacaacatattaaaaaagaagagttagaaaaataatagaagattatga 624
Query: 425 gggtaatgatctattgcccactgaattttttttattcctctgcctagaaagactttatct 484
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 625 gggtaatgatctattgcccactgatttttttttattcctctgcctagaaagactttatct 684
Query: 485 cagttcctcttccaatacaaacttttagattgaaaacttttcaagcacatctgcatctag 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 685 cagttcctcttccaatacaaacttttagattgaaaacttttcaagcacatctgcgtctag 744
Query: 545 aatagtat 552
||||||||
Sbjct: 745 aatagtat 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_c05.g1 MSMg01no432_c05.g1 CHROMAT_FILE:
MSMg01no432_c05.g1 PHD_FILE: MSMg01no432_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:44 2005
(498 letters)
>mm_chr4_67593936_67594833
Length = 898
Score = 932 bits (482), Expect = 0.0
Identities = 488/490 (99%)
Strand = Plus / Minus
Query: 9 aaaagtagcaaactcatctataagaagaaaaggaatatatggactggttgaagaacaagt 68
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 698 aaaagtagcaaactcatctataagaagaaaaggaatatatggattggttgaagaacaagt 639
Query: 69 ctagtctttgtcccccgaataaagagtcaaattattctttcattaaatacaataatacta 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ctagtctttgtcccccgaataaagagtcaaattattctttcattaaatacaataatacta 579
Query: 129 gagtaactggtgtgtacaaagtagcaatttatgtatgagaaaacagtaaataaacagggc 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gagtaactggtgtgtacaaagtagcaatttatgtatgagaaaacagtaaataaacagggc 519
Query: 189 caacaatgccattttaatagagtttataatcactttataagtaaatatatgtaataaaag 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 caacaatgccattttaatagagtttataatcactttataagtaaatatatgtaataaaag 459
Query: 249 aaaaagataaacgcttacttaggcatgaagagtcacaaggaatacaataaaaaaataaag 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aaaaagataaacgcttacttaggcatgaagagtcacaaggaatacaataaaaaaataaag 399
Query: 309 aaatatctgtatgattcaggaaagataagactgaggaagcaacattgaactaagatttga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aaatatctgtatgattcaggaaagataagactgaggaagcaacattgaactaagatttga 339
Query: 369 actgagaagagaataaatcaaacgtttaaataaaaaagggacaaatagatatttgtaata 428
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 actgagaagagaataaataaaacgtttaaataaaaaagggacaaatagatatttgtaata 279
Query: 429 aaataatgaggatggccaaatacatcgagaaataaaaattttatgtttcctagcatctaa 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aaataatgaggatggccaaatacatcgagaaataaaaattttatgtttcctagcatctaa 219
Query: 489 aagaaaattg 498
||||||||||
Sbjct: 218 aagaaaattg 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
