Query= MSMg01no432_c20.b1 MSMg01no432_c20.b1 CHROMAT_FILE:
MSMg01no432_c20.b1 PHD_FILE: MSMg01no432_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:48 2005
(447 letters)
>mm_chr4_75522744_75523586
Length = 843
Score = 816 bits (422), Expect = 0.0
Identities = 437/444 (98%), Gaps = 4/444 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactcacatttatgagaagtctttcttgggaaaaattatttccttctcagtttc 63
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 486 ggaattcactcacatttatgagttgtctttcttgggaaaaattatttccttctcagtttc 427
Query: 64 cccatcttgtacctcagagaaagtaagaagaaaggaaaacagacctcatggaggacccag 123
||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 426 cccatcttgtacctcagagaaagtaagaagaaaggaaaacagacctc----aggacctag 371
Query: 124 cagcagcttccaacctgaaggcctttgggaagagggcacagtttcacctggagtgtgcat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cagcagcttccaacctgaaggcctttgggaagagggcacagtttcacctggagtgtgcat 311
Query: 184 tgaaaatggagattcctgcagtctctccaaatgtactagctttgaggatctaagtttcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgaaaatggagattcctgcagtctctccaaatgtactagctttgaggatctaagtttcag 251
Query: 244 actcctccaggagattgtttggttgttgttgtttgttttccttatcctcttgagacaggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 actcctccaggagattgtttggttgttgttgtttgttttccttatcctcttgagacaggg 191
Query: 304 tctcataaagcatgggttgctcttgacctttctgttccaactgaagataaccttgaactt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tctcataaagcatgggttgctcttgacctttctgttccaactgaagataaccttgaactt 131
Query: 364 ctgatctgcctgcttctatcaccgaagtgcagagatcagaagtgtgtatcaccatgtctg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ctgatctgcctgcttctatcaccgaagtgcagagatcagaagtgtgtatcaccatgtctg 71
Query: 424 ctttatccaagtgatttttaaacc 447
||||||||||||||||||||||||
Sbjct: 70 ctttatccaagtgatttttaaacc 47
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 843
Length adjustment: 10
Effective length of query: 437
Effective length of database: 833
Effective search space: 364021
Effective search space used: 364021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_c20.g1 MSMg01no432_c20.g1 CHROMAT_FILE:
MSMg01no432_c20.g1 PHD_FILE: MSMg01no432_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:48 2005
(446 letters)
>mm_chr4_75414890_75415735
Length = 846
Score = 847 bits (438), Expect = 0.0
Identities = 444/446 (99%)
Strand = Plus / Plus
Query: 1 acttgaagtcattaacacaagaaaagattgatcagggcactaatagcataagcattaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgaagtcattaacacaagaaaagattgatcagggcactaatagcataagcattaaaa 260
Query: 61 ccaacaaataattgggacctcctgaagctataaagtttttgtccacgaaagggttattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaacaaataattgggacctcctgaagctataaagtttttgtccacgaaagggttattga 320
Query: 121 aactctcctaagagtatgttcctatctaccagcaagtgcccaccagccaacatcttctaa 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacgctcctaagagtatgttcctatctaccagcaagtgcccaccagccaacatcttctaa 380
Query: 181 atcacctttttttcttaataaggttaaactgccaaaaaattgactatgttatttctccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcacctttttttcttaataaggttaaactgccaaaaaattgactatgttatttctccag 440
Query: 241 aatcatttggttttctacataagaccaagcttatgatattaatgcacatatttttgtttg 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatcatttggttttccacataagaccaagcttatgatattaatgcacatatttttgtttg 500
Query: 301 ggcagcattaagcaagatgaagtaaattctgcactaacatgaacccagcttatttctaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcagcattaagcaagatgaagtaaattctgcactaacatgaacccagcttatttctaga 560
Query: 361 ccattttgctttttctcatcctcaatgtcctctgttgagttttcagaaaatgcaaagtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccattttgctttttctcatcctcaatgtcctctgttgagttttcagaaaatgcaaagtaa 620
Query: 421 tggcaatgacataagctaaatataat 446
||||||||||||||||||||||||||
Sbjct: 621 tggcaatgacataagctaaatataat 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
