TGCGGCGCTATACGACTCACTATTTCGAGAGATCCGCGGAATTCCAAGGC
TTATCCAGAAAGATCCACTTGCCTTTGAATCGTACCAGCTCCTTCTCTGA
GTCTCCTGACTGCACTCCACGTGTCTGATGAAACATTTATTTGAACAAAC
AAAATACATATGTACAAATAAATACAAATGTCAGGAGCTGACGCCCAAGT
GCAAACACATGTCTTTCCTCATCCCCACCATCTGACAGTCTGACAGGCTA
AAGAGCCTTTTGAATGGAAAGGACTCACAATGCCTCTGAAAGGAATGGCC
AGACAAAAGTACTGTCATCAATTTAATGTCTTTAGGAAATACACTTTTCT
TTAAAAGTAGGATGCTTCGATGACTCACATCCGCAGGACAGGTAACAAAG
GAATAGATGCCTGGAGCCAAGACAGGGAGGCAAACACCTAGGCAGAGACG
TCTTCCCAGCCACGTCACCTGACCTTGTTGCTTGATTGAGGAAGAATTAA
GCACAAGTTTCTCCATCTCCCTGCACAGGGATGCCAGGAAACCAATCATC
ACCCAACCACTTTGTGGGACCATTAAGAGAGCCTTGAACTCCATCTTTGT
CCAAATGAAAGCCACAAGAGATAACTTTTCCTCTGAAGAATCATTTTAAG
ATCCCCAAATGAAAACCGAGAAGGCAATAACCTCTTAAACTCCGGTTTGG
CGGCCTTAACACGGGCTTTTATTGTAAAAAGGTTTTTTTTTTTTACAACG
AAATGCTAAAAGACTCCCTAATCCTGCTTAAAN

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCGCATTTTTTAATGGGG
TTATTTGATTTTCTGGGGTCCACCTTCTTGAGTTCTTTATATATATTGGA
TATTAGTCCCCGATCTGATTTATGATAGGTAAAGATCCTTTCCCAACCTG
TTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTTGCCTTGCAGAAGCT
TTGCAACTTTATGAGGTCCCATTTATCGGTTCCCGATCTTATAGCACAAG
CCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACCCATATCTTCGAGG
CTTTTCCCTACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTG
GAGTTCCTTATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGAATGG
ACCAGTTCGAATTCTTCTACATGATAACCACTAGTTGTGCCAGCACCATT
TGTTGAAAATGCTGGGTTTTTTCCTCTGGATGGTTTTTTGTTCTCTTGCC
AAAGATTCAGTGACCTTAGGCGTGTGTGTTTCTTCTCTGGTCTTCTCTTT
CTGGTCCCCTGTTCTTTATGGCCGGTCTCTTTTTCTGCGCTACGTTTTGT
TCCTCCCATCTTTTTCTTCTATCCTTTTTTTGTTCCGGTTCTTTTTTTTA
TCCTATGAGTTGTCTTGCTTTCTACTTGCCAANTCCGTTATCTTATTTTC
TGTTTTGCTGATTCCCCGTACTCCACTATTCCACCTTTTA

Query= MSMg01no432_e07.b1 MSMg01no432_e07.b1 CHROMAT_FILE:
MSMg01no432_e07.b1 PHD_FILE: MSMg01no432_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:56 2005
         (522 letters)



>mm_chr4_84396921_84397843
          Length = 923

 Score =  978 bits (506), Expect = 0.0
 Identities = 515/518 (99%), Gaps = 1/518 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattccaaggcttatccagaaagat-ccacttgcctttgaatcgtaccagctccttctc 64
           ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccaaggcttattgagaaagattccacttgcctttgaatcgtaccagctccttctc 265

                                                                       
Query: 65  tgagtctcctgactgcactccacgtgtctgatgaaacatttatttgaacaaacaaaatac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgagtctcctgactgcactccacgtgtctgatgaaacatttatttgaacaaacaaaatac 325

                                                                       
Query: 125 atatgtacaaataaatacaaatgtcaggagctgacgcccaagtgcaaacacatgtctttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atatgtacaaataaatacaaatgtcaggagctgacgcccaagtgcaaacacatgtctttc 385

                                                                       
Query: 185 ctcatccccaccatctgacagtctgacaggctaaagagccttttgaatggaaaggactca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctcatccccaccatctgacagtctgacaggctaaagagccttttgaatggaaaggactca 445

                                                                       
Query: 245 caatgcctctgaaaggaatggccagacaaaagtactgtcatcaatttaatgtctttagga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 caatgcctctgaaaggaatggccagacaaaagtactgtcatcaatttaatgtctttagga 505

                                                                       
Query: 305 aatacacttttctttaaaagtaggatgcttcgatgactcacatccgcaggacaggtaaca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aatacacttttctttaaaagtaggatgcttcgatgactcacatccgcaggacaggtaaca 565

                                                                       
Query: 365 aaggaatagatgcctggagccaagacagggaggcaaacacctaggcagagacgtcttccc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aaggaatagatgcctggagccaagacagggaggcaaacacctaggcagagacgtcttccc 625

                                                                       
Query: 425 agccacgtcacctgaccttgttgcttgattgaggaagaattaagcacaagtttctccatc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agccacgtcacctgaccttgttgcttgattgaggaagaattaagcacaagtttctccatc 685

                                                 
Query: 485 tccctgcacagggatgccaggaaaccaatcatcaccca 522
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tccctgcacagggatgccaggaaaccaatcatcaccca 723


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 923
Length adjustment: 10
Effective length of query: 512
Effective length of database: 913
Effective search space:   467456
Effective search space used:   467456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)