Query= MSMg01no432_h07.b1 MSMg01no432_h07.b1 CHROMAT_FILE:
MSMg01no432_h07.b1 PHD_FILE: MSMg01no432_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:11 2005
(419 letters)
>mm_chr4_134681421_134682238
Length = 818
Score = 685 bits (354), Expect = 0.0
Identities = 378/386 (97%), Gaps = 1/386 (0%)
Strand = Plus / Minus
Query: 34 aaagatcgaaaggctccatagagcaaaaggagcgagtcatacaggcaacggcttacagaa 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 aaagatcgaaaggctccatagagcaaaaggagcgagtcatacaggcaacggcttacagaa 759
Query: 94 tggggagaactggtttgcttgctctgtacctgacaaattagtatctagaatatacgaaca 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tggggagaactggtttgcttgctctgtacctgacaaattagtatctagaatatacgaaca 699
Query: 154 acaacaacatcatcaacaacaaaatgagcagacaattctccaaagatgaaatgcaaatgg 213
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 acaacaacattatcaacaacaaaatgagcagacaattctccaaagatgaaatgcaaatgg 639
Query: 214 gcaatagatgtttgaaaaatgagcgtccccagagtaagactattattaacccacactgca 273
||||||||||||||||||| |||||||||||||||||||| || | |||||||||||||
Sbjct: 638 gcaatagatgtttgaaaaacgagcgtccccagagtaagacaatcaa-aacccacactgca 580
Query: 274 tgcaaacccccctccacaggcattaagaaaagcagcaaactctggcctggcgaggcagga 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 579 tgcaaacccccctccacaggcattaagaaaagcagcaaactctggcctggcgaggcacga 520
Query: 334 gggagcctttctgtacttctggtaagaagctgatcttgctaccgtgcaagtcagttagag 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gggagcctttctgtacttctggtaagaagctgatcttgctaccgtgcaagtcagttagag 460
Query: 394 gggcttcaagaaactagaaatagctg 419
|| |||||||||||||||||||||||
Sbjct: 459 ggtcttcaagaaactagaaatagctg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 818
Length adjustment: 9
Effective length of query: 410
Effective length of database: 809
Effective search space: 331690
Effective search space used: 331690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_h07.g1 MSMg01no432_h07.g1 CHROMAT_FILE:
MSMg01no432_h07.g1 PHD_FILE: MSMg01no432_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:11 2005
(417 letters)
>mm_chr4_134520543_134521359
Length = 817
Score = 775 bits (401), Expect = 0.0
Identities = 413/417 (99%)
Strand = Plus / Plus
Query: 1 ttgcaccagccatgggggaagatgggattatcatcatctctgttttgcttagggggaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 ttgcaccagccatgggggaagatgggattatcatcatctctgttttgcttaggaggaaac 260
Query: 61 tgaggcacagataacctgtaaatgattgtctaggccaggcctgatcgcctgcccagagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaggcacagataacctgtaaatgattgtctaggccaggcctgatcgcctgcccagagaa 320
Query: 121 ctacattgacagctcttgctccttggaagtggctgtggtgtcgaggaaagtgaggctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctacattgacagctcttgctccttggaagtggctgtggtgtcgaggaaagtgaggctcag 380
Query: 181 aatatcagcagagattggcgttctggctcctgtaggagtccatttatcttcctcctgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatatcagcagagattggcgttctggctcctgtaggagtccatttatcttcctcctgtca 440
Query: 241 ccggctcctgatatagctatttttctgccttccggaaatgtgtggaaggcttaagggcct 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccggctcctgagatagctatttttctgccttccggaaatgtgtggaaggcttaagggcct 500
Query: 301 gttcctcctgccagcgagcgcggtttgcagagaggcaacagccaactgccacttcgcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttcctcctgccagcgagcgcggtttgcagagaggcaacagccaactgccacttcgcaaa 560
Query: 361 gatggctgcatggatctcactggagcttaaacatgtattgcgttaccctctgcctct 417
||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 gatggctgcgtggatctcactggagcttaaacatgtattgtgttaccctctgcctct 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
