Query= MSMg01no433_b16.b1 MSMg01no433_b16.b1 CHROMAT_FILE:
MSMg01no433_b16.b1 PHD_FILE: MSMg01no433_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:06 2005
(345 letters)
>mm_chr4_109532907_109533651
Length = 745
Score = 630 bits (326), Expect = 0.0
Identities = 341/346 (98%), Gaps = 2/346 (0%)
Strand = Plus / Plus
Query: 1 caagtactccacatgctcttgattacagagtgtgtccaatttccatgattcagacaatct 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagtactccacacgctcttgattacagagtgtgtccaatttccatgattcagacaatct 260
Query: 61 aggttccagttctagctgaatatcttactgactcactggaagatgggataagtcatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggttccagttctagctgaatatcttactgactcactggaagatgggataagtcatttct 320
Query: 121 aagcttgagtttcctcatatgctaatgagggtatgaatatctactttacagatacactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcttgagtttcctcatatgctaatgagggtatgaatatctactttacagatacactct 380
Query: 181 ggagatttatgtaaataataattgcaaaattaagtgtatctggtttataatagatgattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagatttatgtaaataataattgcaaaattaagtgtatctggtttataatagatgattg 440
Query: 241 tatattattagtcttcctatcttagttattctcatctaataaaaaaa-ttgtgctttgaa 299
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 tataaaattagtcttcctatcttagttattctcatctaataaaaaaaattgtgctttgaa 500
Query: 300 gaaagaattttccatgcttacttttgtattatttttaatctaattt 345
||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 gaaagaattttccatgcttacttttgtattattttta-tctaattt 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_b16.g1 MSMg01no433_b16.g1 CHROMAT_FILE:
MSMg01no433_b16.g1 PHD_FILE: MSMg01no433_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:06 2005
(200 letters)
>mm_chr4_109724822_109725421
Length = 600
Score = 371 bits (192), Expect = e-107
Identities = 198/200 (99%)
Strand = Plus / Minus
Query: 1 cataaaccaaacacacaactgggaaagtggagaagacggagggagaatcaggaacatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cataaaccaaacacacaactgggaaagtggagaagacggagggagaatcaggaacatctc 341
Query: 61 cagaaagataaagagactgtgacggtgttggatggggttgagaagaacaaaataatcaga 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cagaaagataaagaggctgtgacggtgttggatggggttgagaagaacaaaataatcaga 281
Query: 121 gttcttagaaatctgggatgtgatagtcagaagtcactaggacaaaaattcaagggataa 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gttcttagaaaactgggatgtgatagtcagaagtcactaggacaaaaattcaagggataa 221
Query: 181 attggagtagacattgaaag 200
||||||||||||||||||||
Sbjct: 220 attggagtagacattgaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 600
Length adjustment: 8
Effective length of query: 192
Effective length of database: 592
Effective search space: 113664
Effective search space used: 113664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
