Query= MSMg01no438_p13.b1 MSMg01no438_p13.b1 CHROMAT_FILE:
MSMg01no438_p13.b1 PHD_FILE: MSMg01no438_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:57 2005
(581 letters)
>mm_chr4_75099904_75100885
Length = 982
Score = 1017 bits (526), Expect = 0.0
Identities = 541/546 (99%), Gaps = 1/546 (0%)
Strand = Plus / Minus
Query: 37 gttcaccatgtggattataagccctttgggggtggtcacatatcaggtattctacatagc 96
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 gttcaccatatggattataagccctttgggggtggtcacatatcaggtattctacatagc 923
Query: 97 agatatttacattgaaattcataacagtagcaaaattaaaattatgaagtagcaaaaaca 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 agatatttacattgaaattcataacagtagcaaaattaaaattatgaagtagcaaaaaca 863
Query: 157 taattttatggttgggcagtcaacaaaacatgtggaactgtattaaaaggttgcagcatt 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 taattttatggttgggcagtcaacaaaacatgtggaactgtattaaaaggttgcagcatt 803
Query: 217 aagagacttgagagccactgatttaaacaatgatgcacaaatgcattttagaaagagtgg 276
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 802 aagagacttgagagccactgatttaaacaatgatgcacaaatgcattttagaaaaagtgg 743
Query: 277 gataaacaaccatattttattgtgtgttcatgttatataactttgctgaaataagttttg 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gataaacaaccatattttattgtgtgttcatgttatataactttgctgaaataagttttg 683
Query: 337 tctcttttaagcacaagaaatctcagttacaatggtttttaaacatgtacccctacatat 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tctcttttaagcacaagaaatctcagttacaatggtttttaaacatgtacccctacatat 623
Query: 397 catctctgggaaa-ggggaattttgaaaaatataataagcatcctatcatctctcctaca 455
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 622 catctctgggaaaaggggaactttgaaaaatataataagcatcctatcatctctcctaca 563
Query: 456 ctgagaattttcccctggatattttttacatcatatttcaggaagataaaaaaatatgta 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctgagaattttcccctggatattttttacatcatatttcaggaagataaaaaaatatgta 503
Query: 516 tctgttcattgaaactttaggcaagaaaagttggactctgagattgagtcaattgtccgc 575
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 502 tctgttcattgaaactttaggcaagaaaagttggattctgagattgagtcaattgtccgc 443
Query: 576 aattgt 581
||||||
Sbjct: 442 aattgt 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 982
Length adjustment: 10
Effective length of query: 571
Effective length of database: 972
Effective search space: 555012
Effective search space used: 555012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_p13.g1 MSMg01no438_p13.g1 CHROMAT_FILE:
MSMg01no438_p13.g1 PHD_FILE: MSMg01no438_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:57 2005
(485 letters)
>mm_chr4_75040623_75041507
Length = 885
Score = 915 bits (473), Expect = 0.0
Identities = 482/485 (99%)
Strand = Plus / Plus
Query: 1 agaggaatggaaattagtattggaaataagcaattaaaatctctaagatgattacattaa 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 agaggaatggaaattagtattggaaataagcaattaaaatccctaagatgattacattaa 260
Query: 61 agataaaatacaataagttaaaaataccatctgggggaaaggaatctgatattgagccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agataaaatacaataagttaaaaataccatctgggggaaaggaatctgatattgagccag 320
Query: 121 aaagaaaatgcccaagaaggtccaggattcaaggactttttttttttaaccttttcactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagaaaatgcccaagaaggtccaggattcaaggactttttttttttaaccttttcactc 380
Query: 181 tctgcaagatgcatggtttctatgtatatagtgttaaaagcttccactgttctgcagccc 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgcaagatgcagggtttctatgtatatagtgttaaaagcttccactgttctgcagccc 440
Query: 241 caagtgcgggaacatatgggctgcaatctctcacaacaggacaagatgggaactacctgc 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagtgcaggaacatatgggctgcaatctctcacaacaggacaagatgggaactacctgc 500
Query: 301 caattcttccttggcattcccctggattaaggatttttatgtcttgcccttactggtgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caattcttccttggcattcccctggattaaggatttttatgtcttgcccttactggtgta 560
Query: 361 attcattaagttagttacagcagcttttaaatattttatattctttccctgctccattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attcattaagttagttacagcagcttttaaatattttatattctttccctgctccattct 620
Query: 421 catatgtgatagatgatttttctagtttggacccaaagatcaccattgtaatccatttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catatgtgatagatgatttttctagtttggacccaaagatcaccattgtaatccatttga 680
Query: 481 gtctc 485
|||||
Sbjct: 681 gtctc 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
