Query= MSMg01no439_i10.b1 MSMg01no439_i10.b1 CHROMAT_FILE:
MSMg01no439_i10.b1 PHD_FILE: MSMg01no439_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:40 2005
(197 letters)
>mm_chr4_16176464_16177060
Length = 597
Score = 381 bits (197), Expect = e-110
Identities = 197/197 (100%)
Strand = Plus / Plus
Query: 1 gtctactgaccactcagtattgtttggtatctgtaaacatttctgtttaggtctttcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctactgaccactcagtattgtttggtatctgtaaacatttctgtttaggtctttcatg 260
Query: 61 gtataattgatgctctttaaaactgtcaatgtacaacagagcttatgtttcagttggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtataattgatgctctttaaaactgtcaatgtacaacagagcttatgtttcagttggttt 320
Query: 121 tcctgttctgttgtggacagaaaataaaaggagtgcctagctcctttcctcatttcaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctgttctgttgtggacagaaaataaaaggagtgcctagctcctttcctcatttcaaag 380
Query: 181 ttgctaccagtgtatgc 197
|||||||||||||||||
Sbjct: 381 ttgctaccagtgtatgc 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 597
Length adjustment: 8
Effective length of query: 189
Effective length of database: 589
Effective search space: 111321
Effective search space used: 111321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no439_i10.g1 MSMg01no439_i10.g1 CHROMAT_FILE:
MSMg01no439_i10.g1 PHD_FILE: MSMg01no439_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:40 2005
(196 letters)
>mm_chr4_16346709_16347304
Length = 596
Score = 209 bits (108), Expect = 9e-59
Identities = 135/144 (93%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 54 gagaagctgagaaatttcttaatgggttacaaatgttctgggctctatgtggacttgctg 113
||||||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||
Sbjct: 396 gagaagctgagaactttcttaatgagttacaaatgttctgggctgtctgtggacttgctg 337
Query: 114 atactaccagaaagaaatggaatacactcaagtcagtgtaaacaattttttatatagaga 173
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 336 atactaccagaaagaaatggcatacactcaagtcagtgtaaacaattttttatagagaga 277
Query: 174 gtacatgctattgct-actataaa 196
|||||||| |||| | ||||||||
Sbjct: 276 gtacatgcaattg-tcactataaa 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space: 110544
Effective search space used: 110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
