CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCCGCGGA
ATTCTTTGTTCTGCTCTGAGCCCCATTTTTTAAGGGGGTTATTTGATTTT
CTGGAGTCCACCCTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCT
ATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTT
TTGTCTTATTGACAGTGTCTTTTGCCTTGCGAAAGCTTTGCAGTTTCATG
AGGTCCCATTTGTCAATCCTCGATCTTACAGAACAAGCCATTGCTGTTCT
ATTCAGGAATTTTTTCCCCTGTGCCCATATCTTTGAGGCATTTCCCCACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTAGAT
CCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGATTGATTCGCA
TTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATG
CTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAANATCAAGTG
ACCATAGGTGTGTGGGGTCATCTCTGTGCCTTCCATTCTATTCCATTGGG
CTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTATCACATTGTTT
TGTTACAAAGCTTTACGGCCAAGCATGGTGATTTCCCCCAGAAATATCTT
TTTCCCTGGAAAAAAATTCTCCCAN

TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCCATTTTACAGAGGCCAGAGAATTGACAG
GTGATTGGAAAGGCTAGAAGGTATTGCCATCACACACTACTAAGTTCTGG
TTGTGGAGAAAGGGTCAAAAATATTAAAAATCTAGACAAGCTAAGTCAAA
ACTTCTTCATTTCAGTGAGCTGTGATACTAGAATGCTCTGGGATGAACCA
CTTTCCTTTTTCACACTTCTTACTAGCTATAAGGCAGGCATTTATTCAAA
CCACATGGCATCTCCTTCTACAGTGTTCAAATGATGCATGCCTGAACTCC
AACAAACTGTTTTCAACTAAATGAAATGTTAAAGTGCCTGTCACAGTTCA
TGATACACTTATATAAAATTGAGAGTGGATAGGACTGCGTCAAATATCTT
TCCCCATTCGTCATAGAAAGTCCAAAGCTTCCCCAGAGTATATGTTGCAC
AACCTTATGGGATTTAGTCACTACCAAAATTCAACAATTATCTCTTCTAA
GACTTCCCAGGACAGTCACAGGTATGTCTCTGTGCTCGTTGATACTGAAA
GGCCATAGGCATTCTGTACTTTACATCTGAAATTATTCCTGTGTGGAGGA
TATATTCAGGCATGGGAACTATAGGCAGTGAATTGAAATGAACATTACCT
CTTTCTAAACACATCN

Query= MSMg01no439_j17.g1 MSMg01no439_j17.g1 CHROMAT_FILE:
MSMg01no439_j17.g1 PHD_FILE: MSMg01no439_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:46 2005
         (588 letters)



>mm_chr4_65787701_65788693
          Length = 993

 Score = 1085 bits (561), Expect = 0.0
 Identities = 583/593 (98%), Gaps = 5/593 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attttacagaggccagagaattgacaggtgattggaaaggctagaaggtattgccatcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttacagaggccagagaattgacaggtgattggaaaggctagaaggtattgccatcac 260

                                                                       
Query: 61  acactactaagttctggttgtggagaaagggtcaaaaatattaaaaatctagacaagcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acactactaagttctggttgtggagaaagggtcaaaaatattaaaaatctagacaagcta 320

                                                                       
Query: 121 agtcaaaacttcttcatttcagtgagctgtgatactagaatgctctgggatgaaccactt 180
           |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 agtcaaaactccttcatttcagtgagctgtgatactagaatgctctgggatgagccactt 380

                                                                       
Query: 181 tcctttttcacacttcttactagctataaggcaggcatttattcaaaccacatggcatct 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctttgtcacacttcttactagctataaggcaggcatttattcaaaccacatggcatct 440

                                                                       
Query: 241 ccttctacagtgttcaaatgatgcatgcctgaactccaacaaactgttttcaactaaatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttctacagtgttcaaatgatgcatgcctgaactccaacaaactgttttcaactaaatg 500

                                                                       
Query: 301 aaatgttaaagtgcctgtcacagttcatgatacacttatataaaattgagagtggatagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatgttaaagtgcctgtcacagttcatgatacacttatataaaattgagagtggatagg 560

                                                                       
Query: 361 actgcgtcaaatatctttccccattcgtcatagaaagtccaaagcttccccagagtatat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actgcgtcaaatatctttccccattcgtcatagaaagtccaaagcttccccagagtatat 620

                                                                       
Query: 421 gttgcacaaccttatgggatttagtcactaccaaaattcaacaattatctc-----ttct 475
           ||||||||||||||||||||||||||||||||||||||| |||||||||||     ||||
Sbjct: 621 gttgcacaaccttatgggatttagtcactaccaaaattctacaattatctcatctcttct 680

                                                                       
Query: 476 aagacttcccaggacagtcacaggtatgtctctgtgctcgttgatactgaaaggccatag 535
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 aagacttcccaggacagtcacaggtatgtctctgtgctccttgatactgaaaggccatag 740

                                                                
Query: 536 gcattctgtactttacatctgaaattattcctgtgtggaggatatattcaggc 588
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcattctgtactttacatctgaaattattcctgtgtggaggatatattcaggc 793


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 993
Length adjustment: 10
Effective length of query: 578
Effective length of database: 983
Effective search space:   568174
Effective search space used:   568174
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)