Query= MSMg01no439_p03.b1 MSMg01no439_p03.b1 CHROMAT_FILE:
MSMg01no439_p03.b1 PHD_FILE: MSMg01no439_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:12 2005
(451 letters)
>mm_chr4_86279044_86279894
Length = 851
Score = 837 bits (433), Expect = 0.0
Identities = 444/451 (98%), Gaps = 6/451 (1%)
Strand = Plus / Minus
Query: 1 ccagactggctttgaactcacagaaatccatcttcctctgtctcccaagtgttgcgatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ccagactggctttgaactcacagaaatccatcttcctctgtctcccaagtgttgcgatta 619
Query: 61 aaggcatgtatgatcatgcttgtccttgcccttttttttacatttttatttatttacatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaggcatgtatgatcatgcttgtccttgcccttttttttacatttttatttatttacat- 560
Query: 121 ttttgtttttgtttttgtttttgtttgcttttttaaaatttcagtggtgctggtggtagc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 -----tttttgtttttgtttttgtttgcttttttaaaatttcagtggtgctggtggtagc 505
Query: 181 cagtgtgcatggagagtttgaacagtcagaagaacactgtgggcatcatttctttctcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cagtgtgcatggagagtttgaacagtcagaagaacactgtgggcatcatttctttctcct 445
Query: 241 ctcaccaagagggttctgggaaatctaactccaatcatcaggtttggcaacaagcccttc 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 ctcaccaagagggttctgggaaatctaactccaatcattaggtttggcaacaagcccttc 385
Query: 301 tagcttctgaacacctaaccccacctctttaatgagtatcttgctgtgtagtccaggttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tagcttctgaacacctaaccccacctctttaatgagtatcttgctgtgtagtccaggttg 325
Query: 361 cctggaacttactaggagtcctgaactcctggcaatcctctttctcaggttccccagtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctggaacttactaggagtcctgaactcctggcaatcctctttctcaggttccccagtgc 265
Query: 421 tgtgatgccaggtgtgtgccatctcacccag 451
|||||||||||||||||||||||||||||||
Sbjct: 264 tgtgatgccaggtgtgtgccatctcacccag 234
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_p03.g1 MSMg01no439_p03.g1 CHROMAT_FILE:
MSMg01no439_p03.g1 PHD_FILE: MSMg01no439_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:12 2005
(559 letters)
>mm_chr4_86096745_86097703
Length = 959
Score = 1081 bits (559), Expect = 0.0
Identities = 559/559 (100%)
Strand = Plus / Plus
Query: 1 aattagaattcataaaattagattttaaaaagtcatggtaaaaaaaaaagtcagcaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattagaattcataaaattagattttaaaaagtcatggtaaaaaaaaaagtcagcaaagt 260
Query: 61 ggaagaggacagcagaagtagtgaagaaaatgtcagcaatatagaaggaaaattcagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaagaggacagcagaagtagtgaagaaaatgtcagcaatatagaaggaaaattcagcaa 320
Query: 121 ggaagttgagattcttctttaaagggaaatattggaaatgaaaacacagtgaattaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaagttgagattcttctttaaagggaaatattggaaatgaaaacacagtgaattaaaga 380
Query: 181 atgtagaggaaaactgttacccactgactcaaccaagtgaaagaaaccatataatttatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtagaggaaaactgttacccactgactcaaccaagtgaaagaaaccatataatttatg 440
Query: 241 gaggacagagtatgcactgacataccaataaggaggctggggaggtagatggctcagtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggacagagtatgcactgacataccaataaggaggctggggaggtagatggctcagtgc 500
Query: 301 ttaagagtgcttactgctcttgcagagaactagagttcagttcccagcacctgtgtaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaagagtgcttactgctcttgcagagaactagagttcagttcccagcacctgtgtaggg 560
Query: 361 cagctcacaaccacacttgtaactatctgcagaggcaccaactccctcttctgacttcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagctcacaaccacacttgtaactatctgcagaggcaccaactccctcttctgacttcca 620
Query: 421 tggaccaccacacacggagagagacttacacctacataagtaaaaataaacttttctata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggaccaccacacacggagagagacttacacctacataagtaaaaataaacttttctata 680
Query: 481 gtcaaataaatgtcaatacggacaaatagacaaatcagcatgagcacaatgcccaagacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtcaaataaatgtcaatacggacaaatagacaaatcagcatgagcacaatgcccaagacc 740
Query: 541 tctaagatgggatcatgag 559
|||||||||||||||||||
Sbjct: 741 tctaagatgggatcatgag 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
