NGCCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA
GGGGGGGGATTCTTTGTTTTGCCGTGTACCCTATTTTTAATAGGGTTATT
TGTTTGCTCTGGAGTCTAACTTCTTTAGTTCTTTTATATATTGGATATTA
GCCCCCTATCAGATGTAGGATTGGTGAAAATCTTTTCCCAATCTGTTGGT
GAAAGAAAGATGAAATTTCAAGACCTGTAAGTCATATAAAGTACTCAGAA
ATTGCTGGTTGTTTGTGAGCCTAGAGGCTGCCTGGGGCTGAGAAAAAAGA
AAAACAAACCTGGGTATGCCCCGTAGTTATTATATTCCTGGGAACAGCTT
GACCATAAGATAAAGAGAAATGTGAGGACATAACAGGGCTATCTGAACTG
AGCCACCAACTCACAGAACTCTGACACCCTGCACGTACATGTAATTTTTC
TGCTGATGTTTGAATAAGCCAATAGTGTGAATTCCACACCACTAAGCCCC
TTACCCCATAAAAACCCCTAGCTTTCAAGCCTCGTGGCCGACATTCTTTA
TCTCCTGTGTGGGATGCATGTCGGTCCAGAGCTCCGTCATTAAACTACCT
CATGTAATTACATCAGGGCGGTCTATTCATGATTCTTTGGGTGCACGCCG
GATTGGGAATTGAGTGCGGGTTTCCTCACTAGGTTCTATCATTGGGTGCT
GTCTTAAGCAGGGTTTCTATTCTTGGATCTAAACTCTTGATCACNAAGCT
T

GGGGGACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTCAGAAATTCACTTGAAGTCATTAACACA
AGAAAAGATTGATCAGGGCACTAATAGCATAAGCATTAAAACCAACAAAT
AATTGGGACCTCCTGAAGCTATAAAGTTTTTGTCCACGAAAGGGTTATTG
AAACTCTCCTAAGAGTATGTTCCTATCTACCAGCAAGTGCCCACCAGCCA
ACATCTTCTAAATCACCTTTTTTTCTTAATAAGGTTAAACTGCCAAAAAA
TTGACTATGTTATTTCTCCAGAATCATTTGGTTTTCTACATAAGACCAAG
CTTATGATATTAATGCACATATTTTTGTTTGGGCAGCATTAAGCAAGATG
AAGTAAATTCTGCACTAACATGAACCCAGCTTATTTCTAGACCATTTTGC
TTTTTCTCATCCTCAATGTCCTCTGTTGAGTTTTCAGAAAATGCAAAGTA
ATGGCAATGACATAAGCTAAATATAATTAGAAAAGCAATCTGTTGGAAAA
AGAAATGATAATGCTTTTCAAAATGAAGTAGTGTACCATGTAGAGAACTT
GGGCGCAGTCCATTGTTTTAGAGGAGCCATGCCATGGTTCCTCACCATTA
GCCCTGATATTGGAAGAAAGTAATTTCAACTATTTTGACCTCCAAACTAA
CTGAAGTCGCTACATTTTCAAATAACACTGCATAGAGAAGTTTCAGAA

Query= MSMg01no440_i04.g1 MSMg01no440_i04.g1 CHROMAT_FILE:
MSMg01no440_i04.g1 PHD_FILE: MSMg01no440_i04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:59 2005
         (641 letters)



>mm_chr4_75414889_75415929
          Length = 1041

 Score = 1224 bits (633), Expect = 0.0
 Identities = 639/641 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacttgaagtcattaacacaagaaaagattgatcagggcactaatagcataagcattaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacttgaagtcattaacacaagaaaagattgatcagggcactaatagcataagcattaaa 260

                                                                       
Query: 61  accaacaaataattgggacctcctgaagctataaagtttttgtccacgaaagggttattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaacaaataattgggacctcctgaagctataaagtttttgtccacgaaagggttattg 320

                                                                       
Query: 121 aaactctcctaagagtatgttcctatctaccagcaagtgcccaccagccaacatcttcta 180
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacgctcctaagagtatgttcctatctaccagcaagtgcccaccagccaacatcttcta 380

                                                                       
Query: 181 aatcacctttttttcttaataaggttaaactgccaaaaaattgactatgttatttctcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcacctttttttcttaataaggttaaactgccaaaaaattgactatgttatttctcca 440

                                                                       
Query: 241 gaatcatttggttttctacataagaccaagcttatgatattaatgcacatatttttgttt 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatcatttggttttccacataagaccaagcttatgatattaatgcacatatttttgttt 500

                                                                       
Query: 301 gggcagcattaagcaagatgaagtaaattctgcactaacatgaacccagcttatttctag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggcagcattaagcaagatgaagtaaattctgcactaacatgaacccagcttatttctag 560

                                                                       
Query: 361 accattttgctttttctcatcctcaatgtcctctgttgagttttcagaaaatgcaaagta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accattttgctttttctcatcctcaatgtcctctgttgagttttcagaaaatgcaaagta 620

                                                                       
Query: 421 atggcaatgacataagctaaatataattagaaaagcaatctgttggaaaaagaaatgata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atggcaatgacataagctaaatataattagaaaagcaatctgttggaaaaagaaatgata 680

                                                                       
Query: 481 atgcttttcaaaatgaagtagtgtaccatgtagagaacttgggcgcagtccattgtttta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgcttttcaaaatgaagtagtgtaccatgtagagaacttgggcgcagtccattgtttta 740

                                                                       
Query: 541 gaggagccatgccatggttcctcaccattagccctgatattggaagaaagtaatttcaac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaggagccatgccatggttcctcaccattagccctgatattggaagaaagtaatttcaac 800

                                                    
Query: 601 tattttgacctccaaactaactgaagtcgctacattttcaa 641
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tattttgacctccaaactaactgaagtcgctacattttcaa 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)