Query= MSMg01no440_i07.b1 MSMg01no440_i07.b1 CHROMAT_FILE:
MSMg01no440_i07.b1 PHD_FILE: MSMg01no440_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:00 2005
(458 letters)
>mm_chr4_63365885_63366742
Length = 858
Score = 841 bits (435), Expect = 0.0
Identities = 452/463 (97%), Gaps = 10/463 (2%)
Strand = Plus / Minus
Query: 1 ctactgctgagaggaccacctggaggtccatgtttaaatgtggctagcttgtaattgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctactgctgagaggaccacctggaggtccatgtttaaatgtggctagcttgtaattgtag 599
Query: 61 gtaaataaagaggtgtgaccatgatgaagtagggcataggttggatcctgaaggcaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gtaaataaagaggtgtgaccatgatgaagtagggcataggttggatcctgaaggcaaaaa 539
Query: 121 accacaagattgggctttccagtcatgggaacagtgtgaagtacacagaaatagggaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 accacaagattgggctttccagtcatgggaacagtgtgaagtacacagaaatagggaggg 479
Query: 181 gagctggttatttagaggagaggattttgctagagagagaaaaacatatagcagtggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gagctggttatttagaggagaggattttgctagagagagaaaaacatatagcagtggtgc 419
Query: 241 aggttaagt-----ctttttaacttgtagaactaggctgtagacctcctgaacttggcct 295
||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aggttaagtcaaaac-----aacttgtagaactaggctgtagacctcctgaacttggcct 364
Query: 296 tcatgaagagcgggggtgggggagaactgcagacacataacagcaaggcaagctggagct 355
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 363 tcatgaagagcgggggtgggggagaactgcaggcacataacagcaaggcaagctggagct 304
Query: 356 tccaggagactgctctctgccagcttgcttcctgccagggtggctcactgttttccattt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tccaggagactgctctctgccagcttgcttcctgccagggtggctcactgttttccattt 244
Query: 416 acattccatcttatttacctctgggtggaagggaatagaaaaa 458
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 acattccatcttatttacctctgggtggaagggaatagaaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_i07.g1 MSMg01no440_i07.g1 CHROMAT_FILE:
MSMg01no440_i07.g1 PHD_FILE: MSMg01no440_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:00 2005
(249 letters)
>mm_chr4_63189385_63190033
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 gtccctggattggttaagccagtgggtcatcagccgatcatgtatctctggttaagcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtccctggattggttaagccagtgggtcatcagccgatcatgtatctctggttaagcaga 260
Query: 61 accaatcacctggagtggcaaactgtgactaaatggctacatttgggtcattgcctattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaatcacctggagtggcaaactgtgactaaatggctacatttgggtcattgcctattt 320
Query: 121 tataattggtgggccaaagagattgctcagctgtttagggctaggctctcaaccaaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataattggtgggccaaagagattgctcagctgtttagggctaggctctcaaccaaaaat 380
Query: 181 tataagtaattgatggttactcttgtgatgtgtgtctgggctagaagccccatccccgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tataagtaattgatggttactcttgtgatgtgtgtctgggctagaagccccatccccgtg 440
Query: 241 aaacaaaca 249
|||||||||
Sbjct: 441 aaacaaaca 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
