NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCCAGATCCGCG
GAATTCCTGATCTTTTCCCACTGTTATCATGAATGGGTGTTGGATTTTGT
CAAATCTTTTCTCAGCATCTAACAAGATGATCATGTGGTTTTTGTCTTTG
AGTTTGTTTATAAAATGAATTACGTTGATGGATTTCCGTATATTAAACCA
TCCCTGCCTCCTTGNAATAAAACCTACTTGNNTCAGAGGNAGGATGGTTT
TAAGGTTTTTGATCTTCAAAAAAAATTTTTTTGTTAGTTATATAGGTACC
TGAAATTATCCNNTTTTTTTTTTNNNTCTTTTCTNNTCGTTAAAACCNNN
NATATTTTTTNNAATGCAAAAAAAAAGTGAACCTAAAAAAAAGGGGTGGG
GGGTAGGGGGCGGGGGGGGGGGGGCTGGGGGGGGGTNTTTNNTNNNNTTT
TATTATTTTTTNNTTTTTTNNTNTTANNNNANAATTANATTTTTTTTTTT
CTTAATAAAAAAAAATTTTTTTTTTTTTTCCTCTCCCCTTTTTCTCCCCC
CTTTTTTTTCTTTTTTTTTACTTTTTTTTACCCTCCCCCCTCTTTTCCAA
CTTTTATTTCCCTTTTTTTCCCCCTTTTTCCCCCTTTTCTCCTTTTTCCT
TCTCTTTTTTCCTTTCCTTTTTCTCTCTTTTCTCCTCTCCTTTTCTCCTC
TCTTCTTTTCTACTCTTTTCCCCTTTACACATTCCTCCTCACCTCCTTNC
TTTTTCCTCCTCTCTCTTTTTCCCCCTTNTTTCTCTTTCTCTCCTCCTTC
TCATTATTCCACTTCCTTTTTCTCTCTCCTCACATGAATTG

GATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGTATAATGGTAATAGGCATTGTTGT
TGACTTATCAATAGTTGGAAAATAGGCAGTTAGAAGACTGGCATAGAGGA
GAAAAGGGCAGCTAATTTGACCATGGAATGTAGAACCCTACCAAGACTAA
GCATCCAAGAGGTATGATGTATTCTTGTACAAACATGAAAGCATATGCAA
AGAGAACTGGAGCCACCACTCAACTAATGCAGTTGCCTTGAAATGGAAAA
CTGTAAAGAGGGCTGTATGCTTCTGCCCATTAGCTCTATGTAGCAGGAGG
AAAATGAAGTTTCTAGCCACCTATTTATTCTAAGAACGCATGCTAAGCAT
CTGCTACAACATGATCCCAAAGTAAGTGATACCTAAGAAACAAGGGAACA
TCTTAAAGAGTATCCCACCTATCAAGAGCTGCTTTTGTCTAGAAGGGAGA
TTACTTGGGCAGTGAATGTTAGAGTTGTTCCCAAGACACATTCCTTGGGA
GCTTCCAGGTAAGGAAGACTCTCTGCTATAGATTTCCTTCAGAACTACAG
TGCATTGATGATGGCCCAGACAATTCTCATACATGGTGCCAATCAACACA
AACCTTATAGCCATCCCAACACTCATGAGTTCGTTGTTTCACAGATGAGG
TACCAGAGCTAGCTAAAAGAAAAACAGAATGTGAACATCATTGTACCGCC
ACAACTN

Query= MSMg01no444_m17.g1 MSMg01no444_m17.g1 CHROMAT_FILE:
MSMg01no444_m17.g1 PHD_FILE: MSMg01no444_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:48 2005
         (567 letters)



>mm_chr4_65522832_65523797
          Length = 966

 Score = 1065 bits (551), Expect = 0.0
 Identities = 563/567 (99%), Gaps = 1/567 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtataatggtaataggcattgttgttgacttatcaatagttggaaaataggcagttaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tgtataatggtaataggcattgttgttgacttatcaatagttggaaaataggcagttaga 707

                                                                       
Query: 61  agactggcatagaggagaaaagggcagctaatttgaccatggaatgtagaaccctaccaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 agactggcatagaggagaaaagggcagctaatttgaccatggaatgtagaaccctaccaa 647

                                                                       
Query: 121 gactaagcatccaagaggtatgatgtattcttgtacaaacatgaaagcatatgcaaagag 180
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 646 gactaagcatccaagaggtatgatgtattcctgtacaaacatgaaagcatatgcaaagag 587

                                                                       
Query: 181 aactggagccaccactcaactaatgcagttgccttgaaatggaaaactgtaaagagggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aactggagccaccactcaactaatgcagttgccttgaaatggaaaactgtaaagagggct 527

                                                                       
Query: 241 gtatgcttctgcccattagctctatgtagcaggaggaaaatgaagtttctagccacctat 300
           ||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gtatgc-actgcccatcagctctatgtagcaggaggaaaatgaagtttctagccacctat 468

                                                                       
Query: 301 ttattctaagaacgcatgctaagcatctgctacaacatgatcccaaagtaagtgatacct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttattctaagaacgcatgctaagcatctgctacaacatgatcccaaagtaagtgatacct 408

                                                                       
Query: 361 aagaaacaagggaacatcttaaagagtatcccacctatcaagagctgcttttgtctagaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aagaaacaagggaacatcttaaagagtatcccacctatcaagagctgcttttgtctagaa 348

                                                                       
Query: 421 gggagattacttgggcagtgaatgttagagttgttcccaagacacattccttgggagctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gggagattacttgggcagtgaatgttagagttgttcccaagacacattccttgggagctt 288

                                                                       
Query: 481 ccaggtaaggaagactctctgctatagatttccttcagaactacagtgcattgatgatgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ccaggtaaggaagactctctgctatagatttccttcagaactacagtgcattgatgatgg 228

                                      
Query: 541 cccagacaattctcatacatggtgcca 567
           |||||||||||||||||||||||||||
Sbjct: 227 cccagacaattctcatacatggtgcca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 966
Length adjustment: 10
Effective length of query: 557
Effective length of database: 956
Effective search space:   532492
Effective search space used:   532492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)