Query= MSMg01no446_e19.b1 MSMg01no446_e19.b1 CHROMAT_FILE:
MSMg01no446_e19.b1 PHD_FILE: MSMg01no446_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:47 2005
(250 letters)
>mm_chr4_104688269_104688918
Length = 650
Score = 433 bits (224), Expect = e-126
Identities = 230/232 (99%)
Strand = Plus / Minus
Query: 19 acacgctatcagaacagttaggtgatttctaaagactgtttacaaatgggctctgcatac 78
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acaccctatcagaacagttaggtgatttctaaagactgtttacaaatgggctctgcatac 391
Query: 79 tagtttggtaagtatactggaagtccagtgacatggcctcctctgatgtagtcccagaca 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tagtttggtaagtatactggaagtccagtgacatggcctcctctgatgtagtcccagaca 331
Query: 139 gagcaccacagagtttccaaatgaactctggtcctttaagactagaatatacgacactac 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gagcaccacagagtttccaaatgaactctggtcctttaagactagaatatacgacactac 271
Query: 199 atcaaagtacctgcaactcatgattggatataaaattaaacaacttacttga 250
|||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 270 atcaaagtacctgcaactcatgattggatacaaaattaaacaacttacttga 219
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_e19.g1 MSMg01no446_e19.g1 CHROMAT_FILE:
MSMg01no446_e19.g1 PHD_FILE: MSMg01no446_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:47 2005
(208 letters)
>mm_chr4_104556622_104557233
Length = 612
Score = 385 bits (199), Expect = e-111
Identities = 207/211 (98%), Gaps = 4/211 (1%)
Strand = Plus / Plus
Query: 2 tattatgtttctcccctgcaatgtccctgcaca-aaaaaacacagcccaggacagagcag 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 202 tattatgtttctcccctgcaatgtccctgcacataaaaaacacagcccaggacagagcag 261
Query: 61 gtagtgaatatcataactgtcagaggagggaatgaaaactacaggttcacaactgcaacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtagtgaatatcataactgtcagaggagggaatgaaaactacaggttcacaactgcaacg 321
Query: 121 tgagcttttctcattgatcacaagtaataacatttctcaagaa---ctgtccaaggaact 177
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 322 tgagcttttctcattgatcacaagtaataacatttctcaagaagaactgtccaaggaact 381
Query: 178 tgcacacgtttgttggaacaactatttctgt 208
|||||||||||||||||||||||||||||||
Sbjct: 382 tgcacacgtttgttggaacaactatttctgt 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 612
Length adjustment: 9
Effective length of query: 199
Effective length of database: 603
Effective search space: 119997
Effective search space used: 119997
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
