Query= MSMg01no449_f05.b1 MSMg01no449_f05.b1 CHROMAT_FILE:
MSMg01no449_f05.b1 PHD_FILE: MSMg01no449_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:55 2005
(436 letters)
>mm_chr4_129035527_129036362
Length = 836
Score = 710 bits (367), Expect = 0.0
Identities = 425/459 (92%), Gaps = 25/459 (5%)
Strand = Plus / Plus
Query: 1 acaagtgcct--acccggtgggccatctcttagccacttactgtttttcaggacaggatc 58
|||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 199 acaagtgcctttacccggtgggccatctcttagccacttattgtttttcaggacaggatc 258
Query: 59 tcgctcagtagctctggctgtcctagaactcagggtgagcaccctgcctcagcctccttc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcgctcagtagctctggctgtcctagaactcagggtgagcaccctgcctcagcctccttc 318
Query: 119 ataccagggttacagatgtgggctaccatgcccagctgtaaaagaacttcaatttgttct 178
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ataccatggttacagatgtgggctaccatgcccagctgtaaaagaacttcaatttgttct 378
Query: 179 acttacatcttttataccttaatatgcttgttaatgcttttctcttatgttatatgtaag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acttacatcttttataccttaatatgcttgttaatgcttttctcttatgttatatgtaag 438
Query: 239 aaaacattttatgtaatcacctcctcttacttttttttaattcactttagattcagctca 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 439 aaaacattttatgtaatcacctcctcttacttttttttaattcactttagattctgctca 498
Query: 299 ccacccctccccctggccacctcctctcactatcccggttt------------------- 339
|||||||||||||| ||||| |||||||||||||||||||
Sbjct: 499 ccacccctccccctaaccaccacctctcactatcccggtttttgtttggttggttttggg 558
Query: 340 ---gtagtgctagggacagaatccagggccaaattatgcaaaagtgtgttgctgctgcaa 396
||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 559 tttgtagtgctaaggacagaatccagggccaaattatgcaaaattgtgttgctgccgcaa 618
Query: 397 gacaccctcaggcagtttttttttt-ttttttttttttt 434
||||||||||||||||||||||||| |||||||||||||
Sbjct: 619 gacaccctcaggcagttttttttttcttttttttttttt 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_f05.g1 MSMg01no449_f05.g1 CHROMAT_FILE:
MSMg01no449_f05.g1 PHD_FILE: MSMg01no449_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:55 2005
(135 letters)
>mm_chr4_129212627_129213161
Length = 535
Score = 261 bits (135), Expect = 1e-74
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 1 ttccataaaggtgcggtgagttgagtcaccacactgcctattcattcccagtcaatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttccataaaggtgcggtgagttgagtcaccacactgcctattcattcccagtcaatttta 276
Query: 61 tcccatatataggtgttctagattcacccttaaacactggcttatgtaggaaccacgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcccatatataggtgttctagattcacccttaaacactggcttatgtaggaaccacgggc 216
Query: 121 tcttccttttattta 135
|||||||||||||||
Sbjct: 215 tcttccttttattta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 135
Length of database: 535
Length adjustment: 8
Effective length of query: 127
Effective length of database: 527
Effective search space: 66929
Effective search space used: 66929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
