Query= MSMg01no450_b21.b1 MSMg01no450_b21.b1 CHROMAT_FILE:
MSMg01no450_b21.b1 PHD_FILE: MSMg01no450_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:55 2005
(503 letters)
>mm_chr4_55699631_55700532
Length = 902
Score = 942 bits (487), Expect = 0.0
Identities = 499/505 (98%), Gaps = 5/505 (0%)
Strand = Plus / Minus
Query: 1 gctggtaagatgaagacagaggcccttagcaaggccgtgagctcctgcaatctggtctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gctggtaagatgaagacagaggcccttagcaaggccgtgagctcctgcaatctggtctct 643
Query: 61 tcagcttctgtcacctatatgcttattaatctggcactccccccacctacctctgtacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tcagcttctgtcacctatatgcttattaatctggcactccccccacctacctctgtacag 583
Query: 121 aggctgagatctttcacctctgtgcccatgttctttcgttttattgttcatttatcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aggctgagatctttcacctctgtgcccatgttctttcgttttattgttcatttatcaaac 523
Query: 181 tggcactggccccgcaaatttcatttctccttttcagttaggagccttctatctcagaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tggcactggccccgcaaatttcatttctccttttcagttaggagccttctatctcagaac 463
Query: 241 ttggtattaactc--ttttaaggtatccagatatgaatttcacaggcaaattgagaggtc 298
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttggtattaactcaa---taaggtatccagatatgaatttcacaggcaaattgagaggtc 406
Query: 299 tttgatgttcaggtatgtctaattcatctttcctttttccagagctaaggaactcccctg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tttgatgttcaggtatgtctaattcatctttcctttttccagagctaaggaactcccctg 346
Query: 359 accccattggctttggagggagtgaagggccagaaccagggagagcccacactgcaaact 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 accccattggctttggagggagtgaagggccagaaccagggagagcccacactgcaaact 286
Query: 419 ttccagtgtcctacagcaaaagggagctatagggaactgaaatccgaacacatgaatctt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttccagtgtcctacagcaaaagggagctatagggaactgaaatccgaacacatgaatctt 226
Query: 479 gaatcgaacacttctcctgacttca 503
|||||||| ||||||||||||||||
Sbjct: 225 gaatcgaaaacttctcctgacttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 902
Length adjustment: 10
Effective length of query: 493
Effective length of database: 892
Effective search space: 439756
Effective search space used: 439756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_b21.g1 MSMg01no450_b21.g1 CHROMAT_FILE:
MSMg01no450_b21.g1 PHD_FILE: MSMg01no450_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:55 2005
(449 letters)
>mm_chr4_55520057_55520905
Length = 849
Score = 868 bits (449), Expect = 0.0
Identities = 449/449 (100%)
Strand = Plus / Plus
Query: 1 tctaaggccctatggccgttacatgatcaatagacgagttgtcccaattccactatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctaaggccctatggccgttacatgatcaatagacgagttgtcccaattccactatcttc 260
Query: 61 ttaccacccacccaaacaagaatatggtctgtgatcaattatgggatgtcatacgtagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaccacccacccaaacaagaatatggtctgtgatcaattatgggatgtcatacgtagtg 320
Query: 121 ccaatgctccaggtctttaaaattttaaagatgggaatatctcaaactttttccccccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaatgctccaggtctttaaaattttaaagatgggaatatctcaaactttttccccccat 380
Query: 181 tttttggcatattatttcatgtagtccaggctgccctaaacttatagctaagaatggtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttggcatattatttcatgtagtccaggctgccctaaacttatagctaagaatggtct 440
Query: 241 ttagcccctgattatcctgcttttagctcccaggtgtcagagctataaggctggtgtcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttagcccctgattatcctgcttttagctcccaggtgtcagagctataaggctggtgtcac 500
Query: 301 tgtgtttggtcaaactcccttcatggggccagcattgctgtgtaacaaataccaaagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtttggtcaaactcccttcatggggccagcattgctgtgtaacaaataccaaagatg 560
Query: 361 tttcaaaacagaaaattacagagcaaaatctctaatgaacatttgcaaaaatcagggggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcaaaacagaaaattacagagcaaaatctctaatgaacatttgcaaaaatcagggggc 620
Query: 421 tgaagagatggcttagtggctaggaatgg 449
|||||||||||||||||||||||||||||
Sbjct: 621 tgaagagatggcttagtggctaggaatgg 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
