Query= MSMg01no450_c11.b1 MSMg01no450_c11.b1 CHROMAT_FILE:
MSMg01no450_c11.b1 PHD_FILE: MSMg01no450_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:58 2005
(150 letters)
>mm_chr4_125013432_125013989
Length = 558
Score = 228 bits (118), Expect = 1e-64
Identities = 148/158 (93%), Gaps = 8/158 (5%)
Strand = Plus / Minus
Query: 1 atggtaccac-gc-atgaaccttgggggcatttggtccga-tta-atgtggcttgaggg- 55
||||| |||| || ||||||||||||||||||||||| || ||| ||||||||||||||
Sbjct: 358 atggttccacagcaatgaaccttgggggcatttggtctgatttagatgtggcttgagggt 299
Query: 56 atcacacaagag-aggtgaactggacctagtgcagctgtaataaaagatgggcacatctg 114
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atcacacaagagtaggtgaactggacctagtgcagctgtaataaaagatgggcacatctg 239
Query: 115 tgagaggt-ggggcttctgggag-cctcatgtcagcag 150
|||||||| |||||||||||||| ||||||||||||||
Sbjct: 238 tgagaggtgggggcttctgggagtcctcatgtcagcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 558
Length adjustment: 8
Effective length of query: 142
Effective length of database: 550
Effective search space: 78100
Effective search space used: 78100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_c11.g1 MSMg01no450_c11.g1 CHROMAT_FILE:
MSMg01no450_c11.g1 PHD_FILE: MSMg01no450_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:58 2005
(240 letters)
>mm_chr4_124873166_124873804
Length = 639
Score = 395 bits (204), Expect = e-114
Identities = 231/240 (96%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 1 ttggccccttgagcctggcttgttcagagccttgcctcatcctcaggctagatgctctgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggccccttgagcctggcttgttcagagccttgcctcatcctcaggctagatgctctg- 259
Query: 61 tttgagaatgcacagtagagaggggttacctcccatcccccagggcatgatcttctttaa 120
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttagagaatgcacagtagagaagggttacctcccatcccccagggcatgatcttctttaa 319
Query: 121 gaacaaatggggaagctgctatttggtaaggagtggatggtggggacctgagggccgttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaacaaatggggaagctgctatttggtaaggagtggatggtggggacctgagggccggaa 379
Query: 181 ctttgttctgcttcagggtgtggccaaataaagagaggtttagcaccttagaccctaggt 240
|||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 380 ctttgttctgcttcggggagtggccaaataaggagaggtttagcaccttagaccctaggt 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
