Query= MSMg01no450_m23.b1 MSMg01no450_m23.b1 CHROMAT_FILE:
MSMg01no450_m23.b1 PHD_FILE: MSMg01no450_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:51 2005
(466 letters)
>mm_chr4_86531965_86532836
Length = 872
Score = 855 bits (442), Expect = 0.0
Identities = 462/472 (97%), Gaps = 6/472 (1%)
Strand = Plus / Minus
Query: 1 tttccaccctctgaacctccacgataacaggcagtaaataaaactcagcgctatctctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tttccaccctctgaacctccacgataacaggcagtaaataaaactcagcgctatctctct 613
Query: 61 gctaagaattcccaaactgccagaaaggaaatggaaatcacacaagtatttcacagaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gctaagaattcccaaactgccagaaaggaaatggaaatcacacaagtatttcacagaaca 553
Query: 121 atgagagaccaaacgtctaaatatttttctttaagtcctctggagccacatctcatcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atgagagaccaaacgtctaaatatttttctttaagtcctctggagccacatctcatcaga 493
Query: 181 cttcaattgtttcagaggttcttcagaagttctcagaaaactacgctgacgctg------ 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cttcaattgtttcagaggttcttcagaagttctcagaaaactacgctgacgctgacactg 433
Query: 235 gcacgccaccagcggctgttccacagatgttgggatatgtgctagttacaagcagccttg 294
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 432 gcacgccaccagcggctgccccacagatgttgagatatgtgctagttacaagcagccttg 373
Query: 295 ttatcaagccggcactccagagcccttttggtatcaggggatcaatggctaagacgtcag 354
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttatcaagccggcactcaagagcccttttggtatcaggggatcaatggctaagacgtcag 313
Query: 355 agtgactttggtttacaaaacattgtgttcaaaagggacaggaaacatgtggggtcccgc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agtgactttggtttacaaaacattgtgttcaaaagggacaggaaacatgtggggtcccgc 253
Query: 415 ttcctccctttcagtcccgttcccacatgactccacttacccactacaacta 466
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttcctccctttcagtcccgttcccacatgactccacttacccactacaacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 872
Length adjustment: 10
Effective length of query: 456
Effective length of database: 862
Effective search space: 393072
Effective search space used: 393072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_m23.g1 MSMg01no450_m23.g1 CHROMAT_FILE:
MSMg01no450_m23.g1 PHD_FILE: MSMg01no450_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:52 2005
(408 letters)
>mm_chr4_86352055_86352862
Length = 808
Score = 781 bits (404), Expect = 0.0
Identities = 407/408 (99%)
Strand = Plus / Plus
Query: 1 tctctctgggcttgccggaaccacagaggagcagctggcaggaggaaggtgaaacagtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctctgggcttgccggaaccacagaggagcagctggcaggaggaaggtgaaacagtat 260
Query: 61 tctaggaaaaagagctaaggagtcctatggggtttggaggagctcaagagaaaggtagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaggaaaaagagctaaggagtcctatggggtttggaggagctcaagagaaaggtagac 320
Query: 121 tagcttggtagaatgatgcagatggagattcctaaagatagcagattagttgtagaatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagcttggtagaatgatgcagatggagattcctaaagatagcagattagttgtagaatcg 380
Query: 181 ggcttgtaaataggtaatttgtatataattaagagaataaaattagcttgctgagcaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcttgtaaataggtaatttgtatataattaagagaataaaattagcttgctgagcaagc 440
Query: 241 aggctcttacctcagttcctgcctctcgtggctttatggatgtaaatattagatagttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggctcttacctcagttcctgcctctcgtggctttatggatgtaaatattagatagttta 500
Query: 301 aaaggataagtattacaaaaggcagttcttgtttggatctaagtcatctgttctaagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaggataagtattacaaaaggcagttcttgtttggatctaagtcatctgttctaagact 560
Query: 361 aatagaagcataagcccactgatgatgtaatagttaaagctaatgcta 408
|||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 aatagaagcataagcccactgatgatgtaatagttaaaactaatgcta 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
