NNTTTGTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAATCCCCTGACCCCATGGTAGAAGGAGAGAACTAACTCTT
AAAATTAGTCTTTTGGGGGCTGGGCAGGCTCTGCCAGAAGCAGGTAAGTA
CGTGGTGGAGTAATGGGAGAGAAGGAGAGGCCGAGTGCCTTGTGGGCTCT
AAGGACAGGCAGAACCTGAGACATGAAGGGGGTGAGGAACAGCCTATTGT
GAGAGGCCTGTGCAGCTACCAGAGGCCATGGTGATGTCTGGGGCTGAAGT
CCTGCTGCATTTGGAGCCCATGTTGATGTCCGTAGCCTGTACTACCCCTG
AGGGCTATGAGGATATCTGTGGCCTCTACTACAGCCTGAAACCATGTTGA
TCTCTGAGGGGTATGCAGAGCTGGCCCCTCTCCTTACCTGGCGAGTGGGA
AAGCCAGCTCTGGTTGGTATGGGCATGGGAAAGCTGACGGGCACCCCATC
TATCACCTATATCTTCCCCATCCATGAGCTGCTGGAGCACATGCAGAGAT
GGTCTGGTCCTGCAGATACATAGCCGAGGGATCCCTGGGACTCAGAGCAA
GAGCAGGATATCAGATAGTCTTCCATGAGGGTCTAGCATTGATGTTGTAG
CAGAAGTCAGAGGGCTTGAACCAGCTTAACGATTCATTGCAGTGAACACT
TGAAGCTTTTTGGATGGAAGAGTATACAGCACCATTCACTGCAAATTTCC
TTGCCACAACAATGAATG

NCCCCCCAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTACGTCAACTCCATGGAGA
AAGCATTATTGGTCCCTCTGTATAGATGAAGGAACTGAAATCCAGAGAGA
CAAGGTGACTTAAAGTCACCTGGTACAGTCCACCCAATAAGGGAACTTAA
CTTCTACCCTCTAGTGTTCTTCCATTTCTGAGCTGTCGGCCCCGAGTCTG
GCCTCCTTGGATAACCCATGAGCACAGGATTTAGTTCTAAACATACAAGA
GGAGCTAGACACATGAAATAGGAGGCTTTCTTGAAAAGTAAAGAAATCCT
CTTTTTATTTTTAAACCAGTGAACACAACTTCTAAGCACACAAGGTGAAG
TAGTCACTCCATGGGTCATATCTGGCTACACAGTGGATGAAGGCCATGCT
TTAGTACAGTTAGGCAAGGCACCCAGACCTCTTGAGTCTTCCCACCAAGA
AGGGTGGCTACTGAAAAAAGAAGGCGCCAGCAGACAGCTCAAGAACACCC
ATCTGACAACTCTTCAAGCTGCAAAGAAGCAAGTGGAGCATAAGCTATAA
AACAGAGTGACTGCTCTTTACTAAGTTTACAAACAAGCATATAAATAGTG
AACTGGATTCCTTTGATCCCTGGCTCTGTAAAAGAAACTAGCCCACTCCT
CGAAATTTCCATGGAAAACCTCAGTCCACAGGCCAATAAGTGATGGGCCA
GCCCCCACACTGCTCN

Query= MSMg01no453_j10.g1 MSMg01no453_j10.g1 CHROMAT_FILE:
MSMg01no453_j10.g1 PHD_FILE: MSMg01no453_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:31 2005
         (638 letters)



>mm_chr4_108647349_108648392
          Length = 1044

 Score = 1180 bits (610), Expect = 0.0
 Identities = 633/644 (98%), Gaps = 6/644 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttacgtcaactccatggagaaagcattattggtccctctgtatagatgaaggaactgaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttacgtcaactccatggagaaagcattattggtccctctgtatagatgaaggaactgaaa 260

                                                                       
Query: 61  tccagagagacaaggtgacttaaagtcacctggtacagtccacccaataagggaacttaa 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccagagagataaggtgacttaaagtcacctggtacagtccacccaataagggaacttaa 320

                                                                       
Query: 121 cttctaccctctagtgttcttccatttctgagctgtcggccccgagtctggcctccttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttctaccctctagtgttcttccatttctgagctgtcggccccgagtctggcctccttgg 380

                                                                       
Query: 181 ataacccatgagcacaggatttagttctaaacatacaagaggagctagacacatgaaata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataacccatgagcacaggatttagttctaaacatacaagaggagctagacacatgaaata 440

                                                                       
Query: 241 ggaggctttcttgaaaagtaaagaaatcctctttttattttt------aaaccagtgaac 294
           |||||||||||||||||||||||||||||||||||| |||||      ||||||||||||
Sbjct: 441 ggaggctttcttgaaaagtaaagaaatcctcttttttttttttttttaaaaccagtgaac 500

                                                                       
Query: 295 acaacttctaagcacacaaggtgaagtagtcactccatgggtcatatctggctacacagt 354
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaacttctaaacacacaaggtgaagtagtcactccatgggtcatatctggctacacagt 560

                                                                       
Query: 355 ggatgaaggccatgctttagtacagttaggcaaggcacccagacctcttgagtcttccca 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggatgaaggccatgctttagtacagttaggcaaggcacccagacctcttgagtcttccca 620

                                                                       
Query: 415 ccaagaagggtggctactgaaaaaagaaggcgccagcagacagctcaagaacacccatct 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccaagaagggtggctactgaaaaaagaaggcgccagcagacagctcaagaacacccatct 680

                                                                       
Query: 475 gacaactcttcaagctgcaaagaagcaagtggagcataagctataaaacagagtgactgc 534
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacgactcttcaagctgcaaagaagcaagtggagcataagctataaaacagagtgactgc 740

                                                                       
Query: 535 tctttactaagtttacaaacaagcatataaatagtgaactggattcctttgatccctggc 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctttactaagtttacaaacaagcatataaatagtgaactggattcctttgatccctggc 800

                                                       
Query: 595 tctgtaaaagaaactagcccactcctcgaaatttccatggaaaa 638
           |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 801 tctgtaaaagaaactagcccactcctcgcaatttccatggaaaa 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1044
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1034
Effective search space:   649352
Effective search space used:   649352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)