TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTATTTGCTCCTATTTGCTGTTTTTTTTTCTTCAGAGTTTATGAATCA
GAACTTCATTTTCTATAATTTCTGTCCAGGTGTTACTTTAATATATGTAT
TATTAGCAATGTTGGTCTAAAGAGCTTGGAATTGCTCCTTTCACTCAGTA
TTTGGAAGATTATCTAAAGATTGATGCAACTGTTTTAAACATATATGAAA
ATTCACTCATCTGGTCTTAAATGTTTATTTGTTGAGAGGTGTTTACTATT
CATTTCTTCATTAGAGTTTCTATACTTTTGTGTTTCAATTTCTATTTATT
GGATTTTTGAGTAGTTTTGTCACTCTCTATTTTCAATTTATAATTGTTCA
TAATAGTCTTTTGTTTGTATTTCAATGCTTTTAAAGTTGTAATCTCTCCA
CATTTAGTTATAATATTTCTAATTTTTTTGTTGTTCAAAAAATTCAATTA
AATATTTCCAGGGTCCACTCATAAAACCAAAGTCAAACTATCCTATAAAG
GAGACATGGGAACTTCGAGTTCCTCTCTTTCCACTCACTCAACAGTGATA
ATGCTGCAAAGGTTGGCTGCTCCTCAGACACTACCAAGGGTGTGATTGTC
CACACTGCCCACTGGTTGTTTTTAAAGTATTTGGTATCATTTGGTATCTG
TTTGAACTTTACAGAATCCAGTTTGGACTATAAAG

NTTGTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGAGAGTGAGAAAAATAGTCTT
CCTCAGGGAAGAGGACACCAATTGGTTATCCAATACCAATAAAGGGGTCA
GGCCTGAAAGCATATATGTGAGTAACATCATACAGACTGAACGGTTATGT
TTAACAACACATGTTTTTAGCACTATCTAATATTATATATATTATATAAA
TATATAACATATATTTGAAATTTAACAGCGGATTAAGACCAAGAGGGCCT
TAAATCCTACAAGAAAATTACTTTAAAAACCGCCCAATGGGATTGGAAGG
ATTTGAGTGAATTTAAGAAAAGGGGGAACCCAAGGGAAGTTTATACCTAA
TATTTCCCCAAAAATTAAACAAAATATTTTTATCCCGCAAAAAAGAGAGC
CCCCCCCCTGAAAAAACTCTTCTCTCCCCCCGCGGTGGAAAATTTTTGGC
CCCCCAGGGGAATACCTCGGATAATAGGAAAAACCCCCTCCTAAAAAAAA
AAAAAAACTTTCCCTGGGGGATAATATCCCCTCCCCCCCTTTTTTCACAA
AAATAAAAAAATTGTTTTGTTTTGTGTGGGTGTGAAAAACCTTTTT

Query= MSMg01no455_b19.b1 MSMg01no455_b19.b1 CHROMAT_FILE:
MSMg01no455_b19.b1 PHD_FILE: MSMg01no455_b19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:31 2005
         (629 letters)



>mm_chr4_51284192_51285220
          Length = 1029

 Score = 1064 bits (550), Expect = 0.0
 Identities = 556/558 (99%)
 Strand = Plus / Minus

                                                                        
Query: 72   ataatttctgtccaggtgttactttaatatatgtattattagcaatgttggtctaaagag 131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 ataatttctgtccaggtgttactttaatatatgtattattagcaatgttggtctaaagag 970

                                                                        
Query: 132  cttggaattgctcctttcactcagtatttggaagattatctaaagattgatgcaactgtt 191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969  cttggaattgctcctttcactcagtatttggaagattatctaaagattgatgcaactgtt 910

                                                                        
Query: 192  ttaaacatatatgaaaattcactcatctggtcttaaatgtttatttgttgagaggtgttt 251
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909  ttaaacatatatgaaaattcactcatctggtcttaaatgtttatttgttgagaggtgttt 850

                                                                        
Query: 252  actattcatttcttcattagagtttctatacttttgtgtttcaatttctatttattggat 311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849  actattcatttcttcattagagtttctatacttttgtgtttcaatttctatttattggat 790

                                                                        
Query: 312  ttttgagtagttttgtcactctctattttcaatttataattgttcataatagtcttttgt 371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789  ttttgagtagttttgtcactctctattttcaatttataattgttcataatagtcttttgt 730

                                                                        
Query: 372  ttgtatttcaatgcttttaaagttgtaatctctccacatttagttataatatttctaatt 431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 729  ttgtatttcaatgcttttaaagttgtaatctctccacatttagttataatatttctattt 670

                                                                        
Query: 432  tttttgttgttcaaaaaattcaattaaatatttccagggtccactcataaaaccaaagtc 491
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 669  tttttgttgttcaaaaaattcaattcaatatttccagggtccactcataaaaccaaagtc 610

                                                                        
Query: 492  aaactatcctataaaggagacatgggaacttcgagttcctctctttccactcactcaaca 551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609  aaactatcctataaaggagacatgggaacttcgagttcctctctttccactcactcaaca 550

                                                                        
Query: 552  gtgataatgctgcaaaggttggctgctcctcagacactaccaagggtgtgattgtccaca 611
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549  gtgataatgctgcaaaggttggctgctcctcagacactaccaagggtgtgattgtccaca 490

                              
Query: 612  ctgcccactggttgtttt 629
            ||||||||||||||||||
Sbjct: 489  ctgcccactggttgtttt 472


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space:   630761
Effective search space used:   630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)