Query= MSMg01no456_p07.b1 MSMg01no456_p07.b1 CHROMAT_FILE:
MSMg01no456_p07.b1 PHD_FILE: MSMg01no456_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:58 2005
(350 letters)
>mm_chr4_110901937_110902685
Length = 749
Score = 658 bits (340), Expect = 0.0
Identities = 346/348 (99%), Gaps = 1/348 (0%)
Strand = Plus / Plus
Query: 1 ctttattacatttccgtgccaagggtctaaattgatctctaagtccatctgacccagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttattacatttccgtgccaagggtctaaattgatctctaagtccatctgacccagcta 260
Query: 61 tctctttccaggaaagcttattaaaattggggtgagagcccagaactatcaaatcctgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctttccaggaaagcttattaaaattggggtgagagcccagaactatcaaatcctgtc 320
Query: 121 tcaaggtacctgtgccaaaattctagttgaaatttttaattgagttcaacccttgtaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaggtacctgtgccaaaattctagttgaaatttttaattgagttcaacccttgtaaat 380
Query: 181 agggatacactaatctgaatgttgattaagttttcattccagctgcaggagtgtagccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggatacactaatctgaatgttgattaagttttcattccagctgcaggagtgtagccct 440
Query: 241 atcctgaactccaatgatacaactgcctttctcctctggcactgggttggcttcctcctt 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcctgaactccaatgataca-ctgcctttctcctctggcactgggttggcttcctcctt 499
Query: 301 tggccactggatgtttcctgtacaagggggaaataatggcaaaaagag 348
|||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 500 tggccactggatgtttcctgtagaagggggaaataatggcaaaaagag 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 749
Length adjustment: 9
Effective length of query: 341
Effective length of database: 740
Effective search space: 252340
Effective search space used: 252340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_p07.g1 MSMg01no456_p07.g1 CHROMAT_FILE:
MSMg01no456_p07.g1 PHD_FILE: MSMg01no456_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:58 2005
(391 letters)
>mm_chr4_111077150_111077940
Length = 791
Score = 741 bits (383), Expect = 0.0
Identities = 389/391 (99%)
Strand = Plus / Minus
Query: 1 tttatgtccctttcctttcagaaggtcacagagtaataacaaggttgactctccatagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tttatgtccctttcctttcagaaggtcacagagtaataacaaggttgactctccatagaa 532
Query: 61 aagttagtttagggtcacatagtagtacctcctctttccctgatggctgggcaatgctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aagttagtttagggtcacatagtagtacctcctctttccctgatggctgggcaatgctac 472
Query: 121 tacatgtatggcattgcccatgacctctcctggccaaagggagtggtctgacttagtcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tacatgtatggcattgcccatgacctctcctggccaaagggagtggtctgacttagtcaa 412
Query: 181 gaaagctgagactttactaagatcttcactttttatcttagggttttattgtctgctttt 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 411 gaaagctgagactttactaagatcttcactttttttcttagggttttattgtctgctttt 352
Query: 241 aaaatcatgttcagattttgtatatttaaaacatgcctttggaattatgaaacacaatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aaaatcatgttcagattttgtatatttaaaacatgcctttggaattatgaaacacaatgt 292
Query: 301 tctcaatcataaaaaaagatgaattatgttatactttctatttccctttctgggttttct 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 291 tctcaatcataaaaaaagatgaattatattatactttctatttccctttctgggttttct 232
Query: 361 tctgatctccctgcatgcatttttctgtgat 391
|||||||||||||||||||||||||||||||
Sbjct: 231 tctgatctccctgcatgcatttttctgtgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
