NNTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCATAGTCATTACGCCTCAAGATCTCCATACCATGATCCAGTC
CGAAACTTTTATCTCTCAGCCTACACATTAGGATCAATGATGAGCCTTCC
AATTCTGGATTCTAGTTCATTACAGATATAGTCAAGTTGACAACCAGGAA
TAGCCACTACAAGTTTTATGTTTGGAAAAATTAAAAAAAAATAAAAAAAA
GAATTCTCTATTGCTCTTGATTACTTGCCTTTTTAAGAATTCCATGTCAC
TCACTGACCACAGATAGTAGCACAACATACTATGATGAAGAAGCAAGGAG
TAAGCTAGCATTTGGCATAGAATCTTCAGATCCATGAGAAGGGCCCCTAC
CTAGCAATTATGCAGAATTAAAAAAAAAACAAACAAAAAAGATACTTTAA
TTAACACAGCTGTCCTTAATGTTTTATACTCACATGGAGTCATGAAGACA
TATGAGGGTATTTTGCCAGTACAACGAGATCTGACATTTCAATAACAACT
TGGCAAAGTGAGTTGAAAACAAACACTACAGAAATAATTGCCCACGTGTA
AAAAAAGAAGATTGGTGATTCCAAACAATGGGTTTGGGTCCCCCGCACGG
CAAGGGAAATAAATGGCTCCTCTCACTGGGGGGGTTGGATTTTTCTCACC
TGAAAGCCCCGGAACGACGGGGGAAAACTGAAGGCTGCGGCTGGCTGGGC
CTACTTTATA

NNAAATTNNCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAAGATCGCGTGGC
TAGTGTTGTGGGTATCTGGTGGTAGTCAGCCGAATCTGCGCCCTAGCTAC
CCCGGTGCTGCTCAGACTGAAGGGGGCTTGTGCCCCTACTCAGACCGGGT
TTTCTGCTTTCCTAACTAATGCAGTCTTAGGTCCCGCGCGATTGGATTGG
AGCAGATACTGTGTTCCACTCACCAGAAGTCTTAAGATCGCTTGGTGGGA
GTTGTGGGTAGCTGGAGGTTGTCAGCCAATGTTTTTAGAAAATGTGGTAC
ATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA
ATTCCTAGGCAAATGGGTGGACCTGGAGGGCATCATCCTGAGCGAGGTAA
CCCAATCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATAT
TTGCCCAGAAATTTAGTATACCCCAGATATAAGATACAATTTGGCCAATT
GCTTGAAACTCTAAAAGAATGGAGAACAATTTGGGGAACCTGGGGCCCCT
TTTATAAATGGGAAATAAACCCCCTGGTTGGGGGTTACCTAAATAATTTT
GTGCTGCCCCATAAGTTTTTTTCCTTTTTTATATGGCCTTTCAATGCGTT
TTTCTCCAAATCCATTTTCTTTTGCGTGTCCCTCTGTGC

Query= MSMg01no457_j18.b1 MSMg01no457_j18.b1 CHROMAT_FILE:
MSMg01no457_j18.b1 PHD_FILE: MSMg01no457_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:53 2005
         (459 letters)



>mm_chr4_26800718_26801567
          Length = 850

 Score =  714 bits (369), Expect = 0.0
 Identities = 426/459 (92%), Gaps = 25/459 (5%)
 Strand = Plus / Minus

                                                                       
Query: 16  cattacgcctcaagatctccataccatgatccagtccgaaacttttatctctcagcctac 75
           ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 850 cattatgcctcaagatctccacaccatgatccagtctgaaacttttatctctcagcctac 791

                                                                       
Query: 76  acattaggatcaatgatgagccttccaattctggattctagttcattacagatatagtca 135
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 acattaggatcaatggtgagccttccaattctggattctagttcattacagatatagtca 731

                                                                       
Query: 136 agttgacaaccaggaatagccactacaagttttatgtttggaaaaattaaaaaaaaat-- 193
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  
Sbjct: 730 agttgacaaccaggaatagccactacaagttttatgtttggaaaaa-taaaaaaaaataa 672

                                                                       
Query: 194 -------------aaaaaaaagaattctctattgctcttgattacttgcctttttaagaa 240
                        |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 taataaaaattaaaaaaaaaagaattctctattgctcttgattacttgcctttttaagaa 612

                                                                       
Query: 241 ttccatgtcactcactgaccacagatagtagcacaacatactatgatgaagaagcaagga 300
           |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 611 ttccatgtcactcactgaccacagatagtagcacaacagactatggtgaagaagcaagga 552

                                                                       
Query: 301 gtaagctagcatttggcatagaatcttcagatccatgagaagggcccctacctagcaatt 360
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gaaagctagcatttggcatagaatcttcagatccatgagaagggcccctacctagcaatt 492

                                                                       
Query: 361 atgcagaattaaaaaaaaaacaaacaaaaaagatactttaattaacacagctgtccttaa 420
           ||||||||||||||||||||     ||||||    |||||||||||||||||||||||||
Sbjct: 491 atgcagaattaaaaaaaaaa-----aaaaaa----ctttaattaacacagctgtccttaa 441

                                                  
Query: 421 tgttttatactcacatggagtcatgaagacatatgaggg 459
           ||||||||||||||||||||||||||| |||||||||||
Sbjct: 440 tgttttatactcacatggagtcatgaaaacatatgaggg 402


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 850
Length adjustment: 10
Effective length of query: 449
Effective length of database: 840
Effective search space:   377160
Effective search space used:   377160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)