ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAAACTTCTCCGGAGAAAGAATTATGGCCTTTCAAGCACTCAAAATACC
TTTTGAGATGTATGTGAAAAAGATAATTGAAGAGTTTGGATTGTCCATTG
AGAGGATGTGGGAAGACGGTTTGAATCCAATCAAACATTGTTTTAAATAA
TAGGAGGTGAATTCTCAATAGAACTGTGCACATTGTAAGAGGGGAAAAGG
TGTTACAATTGAAAATTCTGCTTTTCCCTAGAAATTCACTTTATTCTTTA
GAAATGTAGATTTGTCTCCTGAAGTCCAAAATTGCAATGGTATTAGTGGT
TAGATTGTTGGATAGGCCAAGCACAGGGAAATATAATGGAACCTGACATT
TAGTAGGTGACCATCACATGGCTCAAAGTACATTTACTGATATAGAAATG
CTTTTTGATTCATTCCTGATAACAACCCCCAGAGACCTTACAGACCAGGA
AATCTGAGCTTAAAGAAATCTGATATATATATATATTCATTCCATGGTCA
TGAAATTAAAAGCGGACGCACCCACATTATAAGTAAAGTTTCCTTGTCCA
AATATAAGCTTTGGCCTCCATACACCTTTTTTCCGACAAATCACGGAATC
CCACCTTTGGTTTTCAGCAAAGCAGGAATAATCTTTTTTTTCCCTAAAAT
TTTCCCCCCCCCCCGGCTTATACAAATCCCCTTTTTTCTTATTTTATAAT
AAAAACTCTCTTGCCCTTAGAATGGCGTTTTATTAAAACCCT

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTTCTTTGTTCAGTTATCTTGTGACCACTAGG
ATGTCAGCCTTGCAAAAAGAAAAAATATGAAGAAGAGAGTAGAGGGGAGC
AGCACAGAAAATTGGAGCCCAAATCCTCCTATCTTGCAGTTTCTCTCTGA
CTTCTGGACTTTTGTTACATCAGATAAAACATACCTCTTACAGAATCATG
TATGCATATGGTCCATTTTATGTAGCATCTCTTTAAGCACTATGTATTTA
TAGAAGTCTCCATTCTTTCTATGATCATGTAGAAATTAAATACCCAGAAG
TGAAGAAAAGTTTTGTTTCTTGGTTTGATTTGTTTATAGAACACTGCATC
AATATTTAATATATGTAATCTTATTTAATGCTACAAACTATTTTTACTCT
ATAGATAAGGGAACCAATTCTCATGTAATTAAGCAATTTGCCCAAAGTAA
TAGGAATTAGGTTTAGCATTTTGGTTGGTGAAGGCCTGGAGTCCTCCCCT
ACTCTACCTTGGGAAAGCACTGTCTCCCTCTTTCGGTGTGTCCCTTTCTT
GGGTGTACCGGTTTTCTTTTTGCGCTTTTTTTATAGGTACTTGTTGATTC
CCGCTTTATTTTTGCCCCTTTTTACCGGCTGGAGCTGGGGGTGGGCACGT
TGGGGTTTGCTTCCTTCTCTTTTTCCTACTTCTTTTCCCCCCCCTTTCTA
TCCCTTTTTTTTCTCCACATCTCTTCCGCCATCCTT

Query= MSMg01no459_j22.b1 MSMg01no459_j22.b1 CHROMAT_FILE:
MSMg01no459_j22.b1 PHD_FILE: MSMg01no459_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:36 2005
         (427 letters)



>mm_chr4_76647720_76648546
          Length = 827

 Score =  787 bits (407), Expect = 0.0
 Identities = 422/427 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaaagaattatggcctttcaagcactcaaaataccttttgagatgtatgtgaaaaagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 agaaagaattatggcctttcaagcactcaaaataccttttgagatgtatgtgaaaaagat 568

                                                                       
Query: 61  aattgaagagtttggattgtccattgagaggatgtgggaagacggtttgaatccaatcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aattgaagagtttggattgtccattgagaggatgtgggaagacggtttgaatccaatcaa 508

                                                                       
Query: 121 acattgttttaaataataggaggtgaattctcaatagaactgtgcacattgtaagagggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 acattgttttaaataataggaggtgaattctcaatagaactgtgcacattgtaagagggg 448

                                                                       
Query: 181 aaaaggtgttacaattgaaaattctgcttttccctagaaattcactttattctttagaaa 240
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaaaggtgttacaattgaaaattctgcttttccctagaaattcactttattctttagaaa 388

                                                                       
Query: 241 tgtagatttgtctcctgaagtccaaaattgcaatggtattagtggttagattgttggata 300
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 387 tgtagatttgtctcctgaagtccaaaattgcaatggtattagtagttagattgttggata 328

                                                                       
Query: 301 ggccaagcacagggaaatataatggaacctgacatttagtaggtgaccatcacatggctc 360
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 327 ggccaagcacagggaaatataatgaaacctgacatttagtaggtgaccatcacatggctc 268

                                                                       
Query: 361 aaagtacatttactgatatagaaatgctttttgattcattcctgataacaacccccagag 420
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 267 aaagtacatttactgatatagaaatgctttttgattcattcctgataaaaaccctcagag 208

                  
Query: 421 accttac 427
           |||||||
Sbjct: 207 accttac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space:   341924
Effective search space used:   341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no459_j22.g1 MSMg01no459_j22.g1 CHROMAT_FILE:
MSMg01no459_j22.g1 PHD_FILE: MSMg01no459_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:36 2005
         (385 letters)



>mm_chr4_76430135_76430919
          Length = 785

 Score =  721 bits (373), Expect = 0.0
 Identities = 382/385 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttctttgttcagttatcttgtgaccactaggatgtcagccttgcaaaaagaaaaaatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctttgttcagttatcttgtgaccactaggatgtcagccttgcaaaaagaaaaaatat 260

                                                                       
Query: 61  gaagaagagagtagaggggagcagcacagaaaattggagcccaaatcctcctatcttgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagaagagagtagaggggagcagcacagaaaattggagcccaaatcctcctatcttgca 320

                                                                       
Query: 121 gtttctctctgacttctggacttttgttacatcagataaaacatacctcttacagaatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttctctctgacttctggacttttgttacatcagataaaacatacctcttacagaatca 380

                                                                       
Query: 181 tgtatgcatatggtccattttatgtagcatctctttaagcactatgtatttatagaagtc 240
           |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tgtatgcatatggtccatgttatgtagcatctccttaagcactatgtatttatagaagtc 440

                                                                       
Query: 241 tccattctttctatgatcatgtagaaattaaatacccagaagtgaagaaaagttttgttt 300
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 tccattctttctatgatcatgtagaaattaaatacccagaagtgaagataagttttgttt 500

                                                                       
Query: 301 cttggtttgatttgtttatagaacactgcatcaatatttaatatatgtaatcttatttaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttggtttgatttgtttatagaacactgcatcaatatttaatatatgtaatcttatttaa 560

                                    
Query: 361 tgctacaaactatttttactctata 385
           |||||||||||||||||||||||||
Sbjct: 561 tgctacaaactatttttactctata 585


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space:   291776
Effective search space used:   291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)