ATAXXXXXXXXXXXXXXXXXXXXXXXTACAAGAGAGGATCCGCGGAATTC
CTGATGACATTGACCATCATGACTATACAATTGGGCAATCAATAAAATAT
AATCCTAGATATCATAGTTAATATGTAATTTATAGCATTGAGTTTTTGGT
GATAGTTTGAGATGTTTTTCCTTTATTGGATATTTTCTTTATTTATATTT
CAAATGTTATCCCCTTATAGGTCTCCCCTATAGAAACCCCCTGTCTCATC
CTTTTTCCCCTGCCTCTATGAGGGTGCTCCCCCACCCACCCACCCACTTA
CACTTTCCCGCCCTGTCATTCCCCTACACTTGGGCATCAGATCTCCCATA
GAACCAAGGGCTGCTCTTCCCACTGATGTCCAACAATGCCACATACGTGA
CCAGAGTCATAGGTCCCTCCATGTGTACTCTTTCATTGGTGGTCTAGTTC
CTGGAAGCTCGAAGGTCTGGCTGGTTGATACTGTTGCTCCCCCCCCCCCC
CATGGGCTTTCAAACTCCCTCATCTTCCTTAGTACCTTCTCCAACTCCTT
CACTGGCGCTCCATACTTAGTCAAGTGGATGGCTGCAAGTTGTAGGGTCT
CGCAAAGTCTCTTACAATAAATCCTTATCAGGCTCCTGTCAGTAAGTACT
TCCTGATATTTGCATTAGTGTTTAGGTTTGCTGACTGTATTTGATATGAA
TTTATTTG

GCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATTGCATAGCTATGAATACTTACAGTTTCT
ATTTTCTTGACATGAGAGGAGCATCTTTGAACTCTGTGTACCTTAGTGTT
ATATTTGATTTTAAAAAGATTATGTCTATTCAAATGGTTATTGTAACATT
AAGTATCTGTGTGTATGTGTACACATATATGAAAGAGAAATGGGGATGGA
TAGAGACAAATATAAATATCTAACCACCTAATTTGTTTAGTTATATGTAG
ATTTAAAAAACATCTATTTTTGAGATAATAATATAATTTACAACCTTCTC
CCTTTTGGCATTCCAAACTTAAAGTTTTCAAATTCATGTTCCTTTTTAAA
AAATTTTATTTTAATTAGGTATTTTCTCATTTACATTTCCAATGCTATCC
TCAAAGTCCCTCATATCCTCCCCCCTTACTCCCCTACCCACCTACTCCCA
CTTCTTGGCCCTGGCATTCCCCGGTACTGAGGCATATAAAGTTTGCAAGA
CCAATGGGCCTCTCTTTCCACTGATGGCCATCTAGGCCATCTTCTGATAC
ATATGCAGCTAGAGACACGAGCTCCGGGGGGTACTGGGTAGTTCATATTG
TTGTTCCCCCTATAGGGTTGCAGTTCGCTTTAGCTCCTTGGGTACTTTCT
CTAG

Query= MSMg01no460_c07.g1 MSMg01no460_c07.g1 CHROMAT_FILE:
MSMg01no460_c07.g1 PHD_FILE: MSMg01no460_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:18 2005
         (542 letters)



>mm_chr4_92839513_92840456
          Length = 944

 Score =  890 bits (460), Expect = 0.0
 Identities = 512/534 (95%), Gaps = 14/534 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   attgcatagctatgaatacttacagtttctattttcttgacatgagaggagcatctttga 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 attgcatagttatgaatacttacagtttctattttcttgacatgagaggagcatctttga 470

                                                                       
Query: 61  actctgtgtaccttagtgttatatttgatttt-aaaaagattatgtctattcaaatggtt 119
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 469 actctgtgtaccttagtgttatatttgattttaaaaaagattatgtctattcaaatggtt 410

                                                                       
Query: 120 attgtaacattaagtatctgtgtgtatgtgtacacatatatgaaagagaaatggggatgg 179
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 409 attgtaacattaagtatctgtgtgtatgtgtacacatgtatgaaagagaaatggggatgg 350

                                                                       
Query: 180 atagagacaaatataaatatctaaccacctaatttgtttagttatatgtagattt-aaaa 238
           ||||||||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 349 atagagacacatataaaaatctaaccacctaatttgtttagttatatgtacatttaaaaa 290

                                                                       
Query: 239 aacatctatttttgagataataatataatttacaaccttctcccttttggcattccaaac 298
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 289 aacatctatttttgagataataatataatttacaaccttttcccttttggcattccaaac 230

                                                                       
Query: 299 ttaaagttttcaaattcatgttcc----tttttaaaaaattttattttaattaggtattt 354
           ||||| ||||||||||||||||||    |||||   ||||||||||||||||||||||||
Sbjct: 229 ttaaaattttcaaattcatgttccttttttttt---aaattttattttaattaggtattt 173

                                                                       
Query: 355 tc-tcatttacatttccaatgctatcctcaaagtccctcatatcctccccccttactccc 413
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tcttcatttacatttccaatgctatcctcaaagtccctcatatcctccccccttactccc 113

                                                                       
Query: 414 ctacccacctactcccacttcttggccctggcattccccggtactgaggcatataaagtt 473
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 ctacccacccactcccacttcttggccctggcattccccggtactgaggcatataaagtt 53

                                                                 
Query: 474 tgcaagaccaatgggcctctctttccactgatggccat--ctaggccatcttct 525
           |||||||||||||||||||||||||||||||||||  |  ||||||||||||||
Sbjct: 52  tgcaagaccaatgggcctctctttccactgatggc--tgactaggccatcttct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 944
Length adjustment: 10
Effective length of query: 532
Effective length of database: 934
Effective search space:   496888
Effective search space used:   496888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)