Query= MSMg01no460_d21.b1 MSMg01no460_d21.b1 CHROMAT_FILE:
MSMg01no460_d21.b1 PHD_FILE: MSMg01no460_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:26 2005
(525 letters)
>mm_chr4_58644756_58645680
Length = 925
Score = 690 bits (357), Expect = 0.0
Identities = 368/373 (98%), Gaps = 3/373 (0%)
Strand = Plus / Minus
Query: 153 ttttttcaaagttatatatttatttttgctgcatatgaattgatgggttttttttttttt 212
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 922 ttttttcaaagttatatatttatttttgctgcatatgaattgatggg---tttttttttt 866
Query: 213 gtctgcatgcatgtctgtgtgagggtgccagatctcctggaactggagttacaattgcta 272
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 865 gtctgcatgcatgtctgtgtgagggtgccagatctcctggaactggagttacaatttcga 806
Query: 273 gctgccgtgtgctgggattaacctgggtcctctagaagagcaaccagtgcttttaaccac 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gctgccgtgtgctgggattaacctgggtcctctagaagagcaaccagtgcttttaaccac 746
Query: 333 taagacatctgttcagcgccatataatatttcttactagagcatactatcccctaatgtt 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 taagacatctgttcagcgccatataatatttcttactagagcatactatcccctaatgtt 686
Query: 393 tgatataaaattatcaatctagaacacctattattttgtttaattctcactagaagtcac 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgatataaaattatcaatctagaacacctattattttgtttaattctcactagaagtcac 626
Query: 453 aatcaagagcagcttctgtccccttggcaaggagaacggcactgtttcagtctcttgatc 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatcaagagcagcttctgtccccttggcaaggagaacggcactgtttcagtctcttgatc 566
Query: 513 tttgcgatcacac 525
|||||||||||||
Sbjct: 565 tttgcgatcacac 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_d21.g1 MSMg01no460_d21.g1 CHROMAT_FILE:
MSMg01no460_d21.g1 PHD_FILE: MSMg01no460_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:26 2005
(467 letters)
>mm_chr4_58467430_58468296
Length = 867
Score = 888 bits (459), Expect = 0.0
Identities = 465/467 (99%)
Strand = Plus / Plus
Query: 1 aatagccattccacatcttagctattatgaattctgttgccatagcactggacacatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagccattccacatcttagctattatgaattctgttgccatagcactggacacatata 260
Query: 61 tgcataatggaatatcacccagccacaataagcatgaaatagtaagtcacagcagcgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcataatggaatatcacccagccacaataagcatgaaatagtaagtcacagcagcgtgg 320
Query: 121 atggaggtagaagttgtgttgaatgaaaaaagatagacagtgaagggttaattctcacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggaggtagaagttgtgttgaatgaaaaaagatagacagtgaagggttaattctcacac 380
Query: 181 tttcactgatgaaggacaaagctgatcctataacataatggcacagagtaggactcacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcactgatgaaggacaaagctgatcctataacataatggcacagagtaggactcacta 440
Query: 241 aggactgtggggaccaggcactggggaccaagactggaaataagttaacacagggcacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggactgtggggaccaggcactggggaccaagactggaaataagttaacacagggcacca 500
Query: 301 agcccagaggaatgatcaattctcccgttccacagttcaggagggaaatgctaatctatt 360
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 501 agcccagaggaatgatcaattctcctgttccacagctcaggagggaaatgctaatctatt 560
Query: 361 gacagcactctggcatatttcagataactcggatttgaacaaaaataaaagagtaatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacagcactctggcatatttcagataactcggatttgaacaaaaataaaagagtaatttt 620
Query: 421 gaggatggatttgattattacatgtcatgtatgcattgaaacatgtg 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaggatggatttgattattacatgtcatgtatgcattgaaacatgtg 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
