CCCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCACAACATACCAGTCTGTTGACTGAGAAGCACCTAAAGAAA
TGTTCACAGTCCTTAGTGATCAGAGAAATGCAAATCAAAATGACCCTGAG
ATTCCACCTTACACCAATCAGAATGGCTAAGATCAAAACCTCAAGTGACA
ACACATGTTAGATAGGATGTGGAGAAAGAATACTCCTCCATTGCTGGTGG
GATTGCAAACTGGTACAACCACTCTGGAAATCAATCTGGAGATTCCACAG
AAAACTGAAACTAGTCCTATCTTATGAACCAGCTACACCACTCCTGGGCA
TATACCAGATAGATGCTTAATCATTCCACAGGGAACATGTTCCGCTATGC
TCATAAAAGCCTTATCTGTGATAGCCAGAAGCTAGAAACAAGCCAGATGT
CCTACGACAGAAGAATGGATACAGAAAATGTAGTTCATTTACATAATGGA
ATATTACTCAGCTATTAAGAATGAGGACATCCTGAGTTTTGCTGGCAAAT
GGATGGAAGTAGAAAATATCCTGAGTGAGGTAACTGAAGTCAAAAAGAAC
ACACACCGTATATATTCACTGGTAAGTGGATATTAGACCCCCCCAAAAAA
CAGTACAGAATGCATATGACCCAGTCCCCAGAACTCAAAAAGGTTCAACA
AAGTTGAATGGTCCAAGTGTTG

NNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACTGGAGCCTGTACTTAGA
TTTAACGTACATCATCTGCAGCATCCATTCTTACATAGTTGTCTAAACTG
CTTCCCATATCTGCTGAATTCTTAGTAGTAGACTCCATATATACTTAAAA
TTTTGCACAATAGACAGAAGAGCACGAAGAAAAGAATGAAGAAAGGGGAG
TAGATTATAAATCAAAAAGAAAGAAGGGGAGTGGGATTAAATGTGTGTAC
CAGCCTGGTCTACTAAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAA
ACCCTGTCTAGGGAAAAAAAATCGTGTGTGGGGGGGTGTCCGAGAGATGG
AGGGAAGAAAAGATAGCCTGAATTTTTGTTGTCTCTCAGAAATCCTAACC
AAAATATATGTCATACATATAATGTACCTAGAAATCAAAAGGTTTCAAAG
ATGTTTGGAATGTGTAATGATAATATGAACTGGGGGAGGGGGGAGGNTNT
NNTTNNNTNNNNNNTTTTTTTTTTTTTTGTTNTTTTTTTTTTGTTTNTTG
TTNTTTGTTTNNNTGTTTTTTTTTTTTTTTTTTTTTTCGTTCTTTTTTTT
TTTTTGTTTGGCCTTTTTGGTGTGTGTGTGTTTTTTTTGTCTTTTGTCTT
TTTTCTTTCTCTCCCTCTCTTTTCCTGC

Query= MSMg01no461_h11.g1 MSMg01no461_h11.g1 CHROMAT_FILE:
MSMg01no461_h11.g1 PHD_FILE: MSMg01no461_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:04 2005
         (455 letters)



>mm_chr4_38373371_38374225
          Length = 855

 Score =  835 bits (432), Expect = 0.0
 Identities = 450/456 (98%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aactggagcctgtacttagatttaacgtacatcatctgcagcatccattcttacatagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aactggagcctgtacttagatttaacgtacatcatctgcagcatccattcttacatagtt 259

                                                                       
Query: 61  gtctaaactgcttcccatatctgctgaattcttagtagtagactccatatatacttaaaa 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 260 gtctaaactgcttcccatatctgatgaattcttagtagtagactccatatatatttaaaa 319

                                                                       
Query: 121 ttttgcacaatagacagaagagcacgaagaaaagaatgaagaaaggggagtagattataa 180
            |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 320 atttgcacaatagacagaagagcacgaagaagagaatgaagaaaggggagtagattataa 379

                                                                       
Query: 181 atcaaaaagaaagaaggggagtgggattaaatgtgtgtaccagcctggtctactaagtga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atcaaaaagaaagaaggggagtgggattaaatgtgtgtaccagcctggtctactaagtga 439

                                                                       
Query: 241 gttccaggacagccaggactacacagagaaaccctgtctagggaaaaaaaa-tcgtgtgt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 440 gttccaggacagccaggactacacagagaaaccctgtctagggaaaaaaaaatcgtgtgt 499

                                                                       
Query: 300 gggggggtgtccgagagatggagggaagaaaagatagcctgaatttttgttgtctctcag 359
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtgggggtgtccgagagatggagggaagaaaagatagcctgaatttttgttgtctctcag 559

                                                                       
Query: 360 aaatcctaaccaaaatatatgtcatacatataatgtacctagaaatcaaaaggtttcaaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaatcctaaccaaaatatatgtcatacatataatgtacctagaaatcaaaaggtttcaaa 619

                                               
Query: 420 gatgtttggaatgtgtaatgataatatgaactgggg 455
           ||||||||||||||||||||||||||||||||||||
Sbjct: 620 gatgtttggaatgtgtaatgataatatgaactgggg 655


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space:   376025
Effective search space used:   376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)