CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAAACCGCGGAAT
TCTTTGATCCTTTCCACTTGAGCTTTGTACAAGGAGATAAGAATGGGTCA
ACTCAAACTCTTCTACATGATAACTGCCAGTTGTGCCAGCACCATTTGTT
GAAAATGTTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGA
TCAAGCAACCATAGATATGTGGGTTCATTTCTGGGTCTTCAAGTCTATTC
CATTGATCTACCTGACTGTCTGTCACTGTACCAGTACCATAGTACTATGC
AGTTTTGTTTTTGTTTTTATTTTTTTGCTCTGTAGTACAGCTTGAGGTCA
GGCATAGTGATTCCCCCAGAGGTTCATTTATTGTTGAGAATCGTTTTTGC
TATTCTAGGTTTTTTGTTATTCCAGATGAATTTGCAAATTGCCCTTTCTA
ACTTTCTAAGTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAA
TCTGTACATTGCTTTTGGCAGGATAGCCATTTTTACTATATTAATCCTGC
CAATCCATGAGCATGGGAGATCTTTTCCTGGTCTGAGATCTTCTTCAATT
TCCTTCCTGTAAACAATTTTTTGAAAACAAAACCCTCTCTCTTAGCCCTT
CTACCCTTCCTTATTTATTGGGCCTTTATCGAACCTTCACACCCCCCTTA
AGGCTATAAAACCCCCCTTCACATAATTAACTCTGAACTATCTAATGGCG
TACATTTTTTTCCTCACCCCCG

CATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATCTTCCCCATTCAAACAGAGCATTTCCAGC
ATCTTAGCCTCAGGCAATGGAATGTATTGGTTCATATAGTCTCTCTCCAC
ACGGAATAAAACACACAAGTTCTTTCACCAAGGATCATCTGAGACTGGCT
GCTTTTACTAAGCTGTAACTTGGGGAGGACTCTCTCACATGAAGCACTCA
TCATTGGACCTTGGACCCACCTTCCTGGCCAGACCTCCTTCACACACAGA
GGCTTACATCAGAGCACTGGTTCTTGACATTGCCACTGTTACAGCAGCTA
TGGGACCCAAGACACTGGCCACCTGGATCTCTTTATTCCTTTTCCAAGAG
CTGTGACAATTCTGGCATTCCCGGCCAGACTCCAGCCCTATCCACCCTAT
TCATGCAGCAATGTCTGACTCCCCAAAGGCAAGAGGTAAACTGTGGACCC
TACTGGTTCTGGACCTTTCCCTACCCTCTCTAAGGCAGTTAGTTGCTTGA
GCACTTCACCAGTAGAGGTGAAACTTGAATTCCCAATTGCGGGAGTGACT
AGCTACTGACCAGAGCAGCTTGAGGCCCGTGTCATGAGAGGAAGGGCATA
CCTGACACTGACTTGATGGGCCACGAAATCCAAGCCCGAAATTTCCCGAA
ACCTTTAATAAAACCCATCCCCCTCCTCGTTATTAAAATAATAAAACAAG
CCCTGGTTAAGGATTCTCCAAAG

Query= MSMg01no462_j08.g1 MSMg01no462_j08.g1 CHROMAT_FILE:
MSMg01no462_j08.g1 PHD_FILE: MSMg01no462_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:38 2005
         (482 letters)



>mm_chr4_8064339_8065220
          Length = 882

 Score =  893 bits (462), Expect = 0.0
 Identities = 477/482 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccccattcaaacagagcatttccagcatcttagcctcaggcaatggaatgtattggttc 60
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccccattcaaacagagcagttccagcatcttagcctcaggcaatggaatgtattggttc 260

                                                                       
Query: 61  atatagtctctctccacacggaataaaacacacaagttctttcaccaaggatcatctgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatagtctctctccacacggaataaaacacacaagttctttcaccaaggatcatctgag 320

                                                                       
Query: 121 actggctgcttttactaagctgtaacttggggaggactctctcacatgaagcactcatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggctgcttttactaagctgtaacttggggaggactctctcacatgaagcactcatca 380

                                                                       
Query: 181 ttggaccttggacccaccttcctggccagacctccttcacacacagaggcttacatcaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggaccttggacccaccttcctggccagacctccttcacacacagaggcttacatcaga 440

                                                                       
Query: 241 gcactggttcttgacattgccactgttacagcagctatgggacccaagacactggccacc 300
           ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcactggctcctgacattgccactgttacagcagctatgggacccaagacactggccacc 500

                                                                       
Query: 301 tggatctctttattccttttccaagagctgtgacaattctggcattcccggccagactcc 360
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggatctctttattccttttctaagagctgtgacaattctggcattcccggccagactcc 560

                                                                       
Query: 361 agccctatccaccctattcatgcagcaatgtctgactccccaaaggcaagaggtaaactg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agccctatccaccctattcatgcagcaatgtctgactccccaaaggcaagaggtaaactg 620

                                                                       
Query: 421 tggaccctactggttctggacctttccctaccctctctaaggcagttagttgcttgagca 480
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggaccccactggttctggacctttccctaccctctctaaggcagttagttgcttgagca 680

             
Query: 481 ct 482
           ||
Sbjct: 681 ct 682


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space:   411584
Effective search space used:   411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)