CGGGNGGACTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAAACC
CGCGGAATTCTCGGACTGATGCCAAAAGAATCAGCAGTTAAGAGCACTGA
CTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAACAACCACATAACCACA
TGATAGCTCACACTCATCTGTAATGGGATCTGACACCCTCTTCTGGTGTG
TCTGAAGACAGATCCAGTGTACTCGTATACATAAAAATAAATAAATAATA
TGAAGTTCTCATCAGAAAGCCTGACTTGGAATAGGAAGACAGAAGTTCCT
AATGAAGATGTGTGTGTGTGTGTGTGTGTTATATATAGAGAGAGAGAGAG
AGAGAGAGGGAGGGAGAGGTATATTCTCTCCCCCCTTTTTTGGGGGGGGG
NNNNTCCNNGTNGCGGGGTTTCCTTTCTCCCCCTTTTTTTTTTTTTGTCC
GCTCGCGCCCCCCCCCCTCCCTTTCTTCTTTCTCTCGCGCTCCCTTCTGT
TCTTCTTTCTCCCTTCTTCCCCTTTTTTCCTTCCCGTTCCTTGTTTCCTG
CCTCTCTCTTCTTCTCTTTTCCCCGCTTGTCTTCTTTTTTCTCTTCCTCC
TTCCCCCGTCTTCCCGCCTTTTTCTCTTCCCCCTTCTCTCCCTCTTTCCC
CCCCTTTTGTTCCGCCCTGCTCGGGCCTTCCTTTCTTTTTTTTTTTTTTT
TTGCTCCCTTCCCTCTTCGCTTTCCTGCGTTCCGCCCTCGCTCCGCTTCT
TTG

TTTTTTCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCCCTTTTCTCCTCCCCTT
ATGGAAATCTGTTAACATAAAATGCTTGAAATTGTTTTTGGCACGATGAC
TTAGCCATATAATCCTTTACAGAGAAAGACAATAGATAATTGGACAATTA
GAGAGAACATTTCACATGAAATTCTTTACTCTGCCATGAATGAAACTGGA
GGGGTTGGCTCCAAGTGGGAAAGGCACCTAAATTCCCCTCATTTGGTAAT
CAAGGGTTTCTTTCTTCCTCTTTTATTGTTTGGCAGTTTTATTCTTTTTG
TTTTCATTAATTTATTTATTCACTTTACATTCCCATTACATTCCCCCTCC
CAGTCCCACCCCCATAGCCCTCTCCCCCTACTATCCCTTCTCCTTCTCTG
AGGAAGAGAAGCCCCCTGGCACATCAAGTTGCAGCAGGATTAAGGGCACC
CTCTCCCACTGAGGACAGACAAGGCAGCCAGCCCAGCTAGGGAAAAGGGA
TCCAAATGCAGGCAACAGAGTCAGAGACAGCCCCACTCTAACTGTTAGGA
GACAGAGGGATCAAGGGCCCCACAAGAAGACATACAGAGTCCACTAACCT
GACCCATGGGGGGTCCCAGAGACTGAACCCCCAATGAAACTTGGGTTGAG
CAAGAACCAAGTCTCCTTACCCGTTGGCAGCAAAAGGTGTCACCTTGGGC

Query= MSMg01no463_f23.g1 MSMg01no463_f23.g1 CHROMAT_FILE:
MSMg01no463_f23.g1 PHD_FILE: MSMg01no463_f23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:45 2005
         (514 letters)



>mm_chr4_142482816_142483729
          Length = 914

 Score =  752 bits (389), Expect = 0.0
 Identities = 416/427 (97%), Gaps = 4/427 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttccccttttctcctccccttatggaaatctgttaacataaaatgcttgaaattgttttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttccccttttctcctccccttatggaaatctgttaacataaaatgcttgaaattgttttt 368

                                                                       
Query: 61  ggcacgatgacttagccatataatcctttacagagaaagacaatagataattggacaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ggcacgatgacttagccatataatcctttacagagaaagacaatagataattggacaatt 308

                                                                       
Query: 121 agagagaacatttcacatgaaattctttactctgccatgaatgaaactggaggggttggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agagagaacatttcacatgaaattctttactctgccatgaatgaaactggaggggttggc 248

                                                                       
Query: 181 tccaagtgggaaaggcacctaaattcccctcatttggtaatcaagggtttctttcttcct 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tccaagtgggaaaagcacctaaattcccctcatttggtaatcaagggtttctttcttcct 188

                                                                       
Query: 241 cttttattgtttggcagttttattctttttgttttcattaatttatttattcactttaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cttttattgtttggcagttttattctttttgttttcattaatttatttattcactttaca 128

                                                                       
Query: 301 ttcccattacattccccc----tcccagtcccacccccatagccctctccccctactatc 356
           |||||||||||| |||||    |||||||||||||| |||| |||||||||||||||| |
Sbjct: 127 ttcccattacatacccccctcctcccagtcccaccctcataaccctctccccctactacc 68

                                                                       
Query: 357 ccttctccttctctgaggaagagaagccccctggcacatcaagttgcagcaggattaagg 416
           ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  ccttccccttctctgaggaggagaagccccctggcacatcaagttgcagcaggattaagg 8

                  
Query: 417 gcaccct 423
           |||||||
Sbjct: 7   gcaccct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space:   455616
Effective search space used:   455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)