Query= MSMg01no464_f20.b1 MSMg01no464_f20.b1 CHROMAT_FILE:
MSMg01no464_f20.b1 PHD_FILE: MSMg01no464_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:06 2005
(431 letters)
>mm_chr4_127827552_127828381
Length = 830
Score = 741 bits (383), Expect = 0.0
Identities = 419/431 (97%), Gaps = 1/431 (0%)
Strand = Plus / Minus
Query: 1 tggctgctgcagaagtttcctagattcagcctgacttgtcctacaaccctggaaagaaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 630 tggctgctgcagaagtttcctagattcagcctgacttgtcctacaaccctgggaagaaag 571
Query: 61 cacctaacccggcagccatacactagtaagagctgttttgaggtacttccttcctgcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 570 cacctaacccggcagccatacactagtaagagctgttttgaggtacttccttcgtgcaga 511
Query: 121 gccacaacctcatgtcccaagtgcgtgtaaatctcctcttacacctgcatcctgtaagca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 510 gccacaacctcatgtcccaagtgcgtgtaaatctcctcttacacctgcatcctggaagca 451
Query: 181 gtaactagaccatctgtgccctgtctgcccggggtccagtgctatgccaaagacacttat 240
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 450 gtaactagaccatctgtgccctgtctgcccggggtccagcgctatgccaaggacacttaa 391
Query: 241 gtttgctctgaattgaagaaacgagtgatggagtcagctctgctgaagtcattccaaacc 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gtgtgctctgaattgaagaaacgagtgatggagtcagctctgctgaagtcattccaaacc 331
Query: 301 acctgcagccaaggtgcagtgtgaacagtggccagagcatcaggacacagaagggactgt 360
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |
Sbjct: 330 acctgcagccaaggtgcagcgtgagcagtggccagagcatcaggacacagaagggacttt 271
Query: 361 gatcgaggactactgacagaccatcatgggctcaaccagggcatgccagccataatagtg 420
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 270 gatcgaggactactgacagaccatcatgggctcaaccagggcatg-cagccatactagtg 212
Query: 421 aacccttcaga 431
|||||||||||
Sbjct: 211 aacccttcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 830
Length adjustment: 9
Effective length of query: 422
Effective length of database: 821
Effective search space: 346462
Effective search space used: 346462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_f20.g1 MSMg01no464_f20.g1 CHROMAT_FILE:
MSMg01no464_f20.g1 PHD_FILE: MSMg01no464_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:06 2005
(147 letters)
>mm_chr4_127650029_127650575
Length = 547
Score = 277 bits (143), Expect = 3e-79
Identities = 146/147 (99%)
Strand = Plus / Plus
Query: 1 tctgaggacctagactgaataaaattatagttaagaatgtagaaaaccttttaagatagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaggacctagactgaataaaattatagttaagaatgtagaaaaccttttaagatagt 260
Query: 61 gtatttaaaggagaagtgattacttgtgatgaaatattaatagttctgaaaatgtcactc 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatttaaaggagaagtgatcacttgtgatgaaatattaatagttctgaaaatgtcactc 320
Query: 121 agtgtttgtgccgcttggcatttggtt 147
|||||||||||||||||||||||||||
Sbjct: 321 agtgtttgtgccgcttggcatttggtt 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 147
Length of database: 547
Length adjustment: 8
Effective length of query: 139
Effective length of database: 539
Effective search space: 74921
Effective search space used: 74921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
