Query= MSMg01no464_n03.b1 MSMg01no464_n03.b1 CHROMAT_FILE:
MSMg01no464_n03.b1 PHD_FILE: MSMg01no464_n03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:42 2005
(514 letters)
>mm_chr4_9977315_9978228
Length = 914
Score = 886 bits (458), Expect = 0.0
Identities = 500/514 (97%)
Strand = Plus / Plus
Query: 1 cttttccagtctcccaaccccttttatttgtatattagatgacctataactgttacttaa 60
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 cttttctagtctcccaaccccttttatttgtatattagatgacctagaactgttacttaa 260
Query: 61 ttttctgattttctgttcttacttgctaaaaattacttattattttagtgcacgtgttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttctgattttctgttcttacttgctaaaaattacttattattttagtgcacgtgttcg 320
Query: 121 tgagtaagtgtgcacacaatggtatgcacacaaactggaggacaactttcagaagttggt 180
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tgagtgagtgtgcacacaatggtatgcacacaaactggaggacaactttcaggagttggt 380
Query: 181 tctctcaattttgttcgaaaagcagaatctgtcttatttctgccacatagagtataccag 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctctcaattttgtttgaaaagcagaatctgtcttatttctgccacatagagtataccag 440
Query: 241 actagctagtttatgcatttctgagtgattctcctagcgtagcctccccatctcatcata 300
||||||||| |||||| |||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 441 actagctagcctatgcacttctgagtgattcttctagtgtagcctccccatctcatcata 500
Query: 301 ggattgctgggattacagatgcacactacaacatttggctttttacttaggttccaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggattgctgggattacagatgcacactacaacatttggctttttacttaggttccaaaga 560
Query: 361 tagaagccattcatgagagtcatgtggcagatgcttttacctgttgagatgtctcaccaa 420
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 561 tagaagccattcatgagagtcatgtggtagatgcttttacctgtagagatgtctcaccaa 620
Query: 421 tctctttatgttgtcagcattttataaaattgcttctttttgaacttttatgcaaagtgc 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 tctctttatgttgtcagcattttaaaaaattgcttctttttgaacttttatgcaaagtgc 680
Query: 481 tctgatcatactcacccttcctccacactttccc 514
|||||| |||||||||||||||||||||||||||
Sbjct: 681 tctgattatactcacccttcctccacactttccc 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_n03.g1 MSMg01no464_n03.g1 CHROMAT_FILE:
MSMg01no464_n03.g1 PHD_FILE: MSMg01no464_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:42 2005
(382 letters)
>mm_chr4_10156524_10157305
Length = 782
Score = 731 bits (378), Expect = 0.0
Identities = 381/382 (99%)
Strand = Plus / Minus
Query: 1 acttgccagtgggacacctgctatgaaaaggaagcataggcctttgacagcttatgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 acttgccagtgggacacctgctatgaaaaggaagcataggcctttgacagcttatgacaa 523
Query: 61 tcagtagcacaggctggcatgcatactgtcattgcctcatgctgcaatggttgggactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tcagtagcacaggctggcatgcatactgtcattgcctcatgctgcaatggttgggactgt 463
Query: 121 ggcctttgctagatgcgacaggatgaagcaaacccttccagctgtgactattcttgagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggcctttgctagatgcgacaggatgaagcaaacccttccagctgtgactattcttgagac 403
Query: 181 cagttcacagcgtcattgccagctatttggatatttgaaagcagttgaaggagcatacgc 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cagttcacagagtcattgccagctatttggatatttgaaagcagttgaaggagcatacgc 343
Query: 241 agatgccattcatatttatgccatcagaaggggatatttgatgagatatactgagctgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agatgccattcatatttatgccatcagaaggggatatttgatgagatatactgagctgtc 283
Query: 301 tcctcagatttagggctttcttgaatggaaggactgagaaacactttccagtgtgcttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tcctcagatttagggctttcttgaatggaaggactgagaaacactttccagtgtgcttga 223
Query: 361 aggtcacaggatgatgctgtgt 382
||||||||||||||||||||||
Sbjct: 222 aggtcacaggatgatgctgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
