Query= MSMg01no466_e15.b1 MSMg01no466_e15.b1 CHROMAT_FILE:
MSMg01no466_e15.b1 PHD_FILE: MSMg01no466_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:43 2005
(438 letters)
>mm_chr4_59622069_59622906
Length = 838
Score = 789 bits (408), Expect = 0.0
Identities = 430/438 (98%), Gaps = 2/438 (0%)
Strand = Plus / Plus
Query: 1 agcacagggctcatttcccataggctctcccatcctgactctctccagtagacttcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcacagggctcatttcccataggctctcccatcctgactctctccagtagacttcttcc 260
Query: 61 atccccagccctcctcatctgctgtctgctcttttcctttgggaactataggctttgagc 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 atccccagccctcctcatctgctgtctgctcctttcctttgggaactataggctttgagc 320
Query: 121 ttggatttaaaaagaagagaaggaagactaatatggagtcattcttgaaaagcagcatct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 ttggatttaaaaagaagagaaggaagactaatatggagtcattcttgaaaagcagcttct 380
Query: 181 atcaaacagaaggataagcccaaactctaatccagagccttaaatatgctagtgcctttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcaaacagaaggataagcccaaactctaatccagagccttaaatatgctagtgcctttt 440
Query: 241 tatattaggttgagctgctcctggcttgagatctttcatgagtcaaagcacaagcggccg 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaattaggttgagctgctcctggcttgagatctttcatgagtcaaagcacaagcggccg 500
Query: 301 atgtttactgtgcttaatctgtgtgccatagagttacttcctagattcatacagtggatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 atgtttactgtgcttaatctgtgtgccatagagttacttcctagattcatacagtagatt 560
Query: 361 ataggtgggcctgggtagtgtgcatgtgtgtacatatgtatgcacatgcttttgtgtgtg 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataggtgggcctgggtagtgtgtatgtgtgtacatatgtatgcacatgcttttgtgtgtg 620
Query: 421 tgtgtcctgtggtagaga 438
||| |||||||||||||
Sbjct: 621 tgt--cctgtggtagaga 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_e15.g1 MSMg01no466_e15.g1 CHROMAT_FILE:
MSMg01no466_e15.g1 PHD_FILE: MSMg01no466_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:43 2005
(238 letters)
>mm_chr4_59861045_59861682
Length = 638
Score = 445 bits (230), Expect = e-129
Identities = 236/238 (99%)
Strand = Plus / Minus
Query: 1 ttgtgtctcccacagtctcttgtttttttctctgccaaccttgtccccaaaagggactgt 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 438 ttgtgtctcccacagtctcttgtttttttctctgcctaccttgtccccaaaagggactgt 379
Query: 61 tccttcagaaatgtaagatttgggaagagtgagtacagctgactcacagccagaaaacac 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 378 tccttcagaaatgtaagatttgggaagagcgagtacagctgactcacagccagaaaacac 319
Query: 121 aacatgacctgaaattaatgtctgttgcaagctttgggctttgggagttgtttattattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aacatgacctgaaattaatgtctgttgcaagctttgggctttgggagttgtttattattt 259
Query: 181 cagtaaagctggcaagtgcatataattataaaatgtctctgtaattttctaaactgca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cagtaaagctggcaagtgcatataattataaaatgtctctgtaattttctaaactgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
