CCCCAGACNNNNNCCNNNNANCCCATCCTAATAAGNGGNAANNNTTTCCA
AAAAAATAAAANAAATGAAAATTGTATATAAATGTAAAAGATTTGNTTAT
TGGAAAATTAAAATTTANNNATAAAAAAAAATGTGNNTTGATATAAAGNT
TGGGATNNNAGAAAAAAAAAAAAAAAAAAAAATTTTTTANAGGTGCGCCA
ACGAGNCCGCNTCAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGAGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGCGGGGGGGGGG
CGNNCCACCAAAAAAAANNCNNNNNNNNAAANNNNAAAAAAAAAAAAANA
AAANNAAAAAAAAAAAAAAATNNAAAAAANAAAAACCCCNNNNNANAAAA
AAAAAANNNANAANANAANNNNNNAAAAAAAAAAAAAAAAAAAAANNNAA
NNANNNNNNNNNNNATTAAAAAAANNNNNAAAAAATAAAAAAATAAAATA
AAAATTAAAAANAAATAAACAACCAAAAAATAAATCTCCCCTTCTTTTTC
CCTTCTTTTTCCCCCCCATAATTCACCCCCCCCAATATTCTAACCCTTTT
ATTG

NACGCCAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATGATGGCAATGACTTTGTCTT
GTCCAATTTGCAGCCCTTCTCCTTATCTTATGGACATACATTCTTTGTGA
CCACTCTTTTTACAGTGCTCTCTGAGGAACGGGAAGAAACTTATCTTATC
TCTTGGGTCTCCTAAATTATTAGGAGGCATCTCAATCCAGGCACTAGTTT
TGTTTGTTTGTTTGTTTGTTTCCCATTGTTTTATTAACATGCATGGTATC
TCCTTTGAGATATTTATTTTTTAAATAGCAAAATGGTAAATAAAAATGAA
TACTCCAGTGTTACTTGTACAATTTAAATGATAAAAATGTTAACAAAACA
AAATAGACATTTGTGAAACAGCAGTCTTTGTAAGTTTGTAATTGAGTCTG
TAGTAATGTTCCCCTGAACTGGAATTATGGAATTTAACTGTTAATGGCAG
ATGAGAAATAAAATTTGTTTTGGTCATTTGAATATAGTTATATTTAACAT
CTAACATAGTAAATTAATCGCATGTTTAAGGAATTTCCCATTCCTTATAC
GGTTCATGGCTCTCAAACTGAATATTCACTTTCTCTTTTTTTTTTGCAGC
CCCCACCTCTCTATGATCTAATCTCCTTTTTCTCCTGAATCCATTTGGCG
TCTTCTTTCCTTTCCAAAATTGTCTCCACTAAATTTCCCCATCGTGAGTT
CGTTATACTAGTA

Query= MSMg01no466_o09.g1 MSMg01no466_o09.g1 CHROMAT_FILE:
MSMg01no466_o09.g1 PHD_FILE: MSMg01no466_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:34 2005
         (441 letters)



>mm_chr4_30593919_30594759
          Length = 841

 Score =  799 bits (413), Expect = 0.0
 Identities = 434/445 (97%), Gaps = 8/445 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatggcaatgactttgtcttgtccaatttgcagcccttctccttatcttatggacata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgatggcaatgactttgtcttgtccaatttgcagcccttctccttatcttatggacata 260

                                                                       
Query: 61  cattctttgtgaccactctttttacagtgctctctgaggaacgggaagaaacttatctta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattctttgtgaccactctttttacagtgctctctgaggaacgggaagaaacttatctta 320

                                                                       
Query: 121 tctcttgggtctcctaaattattaggaggcatctcaatccaggcactagttttgtttgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcttgggtctcctaaattattaggaggcatctcaatccaggcactagttttgtttgtt 380

                                                                       
Query: 181 tgtttgtttgtttcccattgttttattaacatgcatggtatctcctttgagatatttat- 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 381 tgtttgtttgtttcccattgttttattaacatgcatggtatctcctttgagatatctatc 440

                                                                       
Query: 240 ---tttttaaatagcaaaatggtaaataaaaatgaatactccagtgttacttgtacaatt 296
              |    ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caat----aaatagcaaaatggtaaataaaaatgaatactccagtgttacttgtacaatt 496

                                                                       
Query: 297 taaatgataaaaatgttaacaaaacaaaatagacatttgtgaaacagcagtctttgtaag 356
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 497 taaatgataaaaatgttaacaaaacaatatagacatttgtgaaacagcagtctttgtaag 556

                                                                       
Query: 357 tttgtaattgagtctgtagtaatgttcccctgaactggaattatggaatttaactgttaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttgtaattgagtctgtagtaatgttcccctgaactggaattatggaatttaactgttaa 616

                                    
Query: 417 tggcagatgagaaataaaatttgtt 441
           ||| |||||||||||||||||||||
Sbjct: 617 tggtagatgagaaataaaatttgtt 641


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space:   359424
Effective search space used:   359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)