XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCAAGGATCCGCGGAATTCTC
ACCTGTTCACTACCGAATGGCAGAGAAGCACTTGAAAAAATGTTCAACAT
CCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTC
ACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTG
GCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGAGTGCA
GACTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAACTG
GACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCC
AGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTATGTTCATAG
CAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGCCCCTCA
ACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTA
CTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGG
ACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTCA
CACAATATGTATTCACTGATAAGTGGATATTAGCCCCAAATCTAGGATAC
CCAAGATATAAGATATAATTTGCTAAACACATGAAACTCTCGAAGAATGA
GAACTGGAGTGTGGAACCTTATGCCCCTCC

ATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXACAGGTTAAACTGAAACAGAAAAGGTACTAGA
AACGCTGGTGGTGATGCATAGACACGAGCCCCATTGGGCCCTGGTGAGTG
TAGAGAATGGGTTACAGATCAATCTCAGTATTGGGGTTTGGGCCTTAGTG
TCCACAATATAGGACAGGAGGACTTGTTTTGGAAGGACAACTCCTGCGTA
AAAGCCAGGATTCCTGAAAAGCCGCTCTTCGCTCTCGAGAACAAAGACAC
TGCTAGCATAGGAAGAACAAAGGGAGAAAATGCTCTGACTTTGGGGCCAT
GGCAGTTGGGGCTCCAATAATAAAACCAAAGTGCAAGAGTTATAGTCATT
CAAAATCCCTCCAAAGCGTTACTCCCAAAACCTAACACCCACATGAATCC
TAAAAGAATCTATCCACTGAGCGCCCCACGGCGGCAGACACAACATATAA
GATGACTAATCACCTTATTCTGAGTGTACGTAAAATGCATGTGGTACAAT
GAAAGACATGCAAGAAAGGCAAAAGCAATGAAATAACACTATAAAGTAGG
AAGACTAAAGCAAAAAATGCACAGAAATTTTTAGAATTAAGTAGAATTGA
GATGAATGACCCGAAAAGTTTTTAAAGAAGTAAAAGGGTTTATATACCTC
CTAAAGTTGTTAAGGGGGAAAAAAAAGGATATTATTTG

Query= MSMg01no467_e18.g1 MSMg01no467_e18.g1 CHROMAT_FILE:
MSMg01no467_e18.g1 PHD_FILE: MSMg01no467_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:07 2005
         (472 letters)



>mm_chr4_49224359_49225231
          Length = 873

 Score =  696 bits (360), Expect = 0.0
 Identities = 455/510 (89%), Gaps = 38/510 (7%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaggttaaactgaaacagaaaaggtactagaaacgctggtggtgatgcatagacacgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 747 acaggttaaactgaaacagaaaaggtactagaaacgctggtggtgatgcatagacacaag 688

                                                                       
Query: 61  c---------cccat----------------------------tgggccctggtgagtgt 83
           |         |||||                            ||||||| |||||||||
Sbjct: 687 ccccagtgggcccatggtggtgatgcatagacacaagccccggtgggcccaggtgagtgt 628

                                                                       
Query: 84  agagaatgggttacagatcaatctcagtattggggtttgggccttagtgtccacaatata 143
           |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 627 agagaaagagttacagatcaatctcagtattggggtttggaccttagtgtccacaatata 568

                                                                       
Query: 144 ggacaggaggacttgttttggaaggacaactcctgcgtaaaagccaggattcctgaaaag 203
           |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||
Sbjct: 567 ggacaggaggacttgttttggaaggacaacacctgtgtaaaagccagtattcctgaaaag 508

                                                                       
Query: 204 ccgctcttcgctctcgagaacaaagacactgctagcataggaagaacaaagggag-aaaa 262
            |||||||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 507 tcgctcttcgctctcaagaacaaagacactgctagcataagaagaacacagggagaaaaa 448

                                                                       
Query: 263 tgctctgactttggggccatggcagttggggctccaataataaaaccaaagtgcaagagt 322
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgctctgactttggggccatgggagttggggctccaataataaaaccaaagtgcaagagt 388

                                                                       
Query: 323 tatagtcattcaaaatccctccaaagcgttactcccaaaacctaacacccacatgaatcc 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tatagtcattcaaaatccctccaaagcgttactcccaaaacctaacacccacatgaatcc 328

                                                                       
Query: 383 taaaagaatctatccactgagcgccccacggcggcagacacaacatataagatgactaat 442
           ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||
Sbjct: 327 taaaagaatctatccactgagcgccacacggtggcagacacaacaaataagatgactaat 268

                                         
Query: 443 caccttattctgagtgtacgtaaaatgcat 472
           |||||||||||||| |||||||||||||||
Sbjct: 267 caccttattctgagagtacgtaaaatgcat 238


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 873
Length adjustment: 10
Effective length of query: 462
Effective length of database: 863
Effective search space:   398706
Effective search space used:   398706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)