Query= MSMg01no467_g09.b1 MSMg01no467_g09.b1 CHROMAT_FILE:
MSMg01no467_g09.b1 PHD_FILE: MSMg01no467_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:15 2005
(430 letters)
>mm_chr4_108932510_108933339
Length = 830
Score = 706 bits (365), Expect = 0.0
Identities = 388/399 (97%), Gaps = 7/399 (1%)
Strand = Plus / Plus
Query: 1 caagagagaaagaggtgggatagaggaaggtaagagaaggtcaaagaggaatttgcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 caagagagaaagaggtgggatagaggaaggtaagagaaggtcaaagaggaatttgcttct 259
Query: 61 ggggttcttacaatgtccttcagttcaaattacttggcacaacagaacactatacttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggggttcttacaatgtccttcagttcaaattacttggcacaacagaacactatacttggt 319
Query: 121 ggcgctgcttcacaagccccagtacaccgcttactatatagcttctcgtctaccttcttt 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggcactgcttcacaagccccagtacaccgcttactatatagcttctcgtctaccttcttt 379
Query: 181 tttattgtttgtttgtttgtttttcaaggcagggccttcctctgtagcccaggctgactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttattgtttgtttgtttgtttttcaaggcagggccttcctctgtagcccaggctgactt 439
Query: 241 ctttttt----attttttttaagtcagagtgcaggtaacttgttagtaacatttccaagt 296
|| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctat---ccagattttttttaagtcagagtgcaggtaacttgttagtaacatttccaagt 496
Query: 297 tgcttggagctggaagtttgatccagtgatctacaactgagtttcagcttcttcgatgcc 356
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 497 tgcttggagctggaagtttgatccagtgatctacaactgagtttcagtttcttcgatgcc 556
Query: 357 ttcagttagatatccaggaaattaaaatttctggtttac 395
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 557 ttcagttagatatccaggaaattaaaatttctgggttac 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_g09.g1 MSMg01no467_g09.g1 CHROMAT_FILE:
MSMg01no467_g09.g1 PHD_FILE: MSMg01no467_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:15 2005
(371 letters)
>mm_chr4_109125766_109126536
Length = 771
Score = 717 bits (371), Expect = 0.0
Identities = 371/371 (100%)
Strand = Plus / Minus
Query: 1 attgccttaggtctttttaaatagtgtattattatcgttggggctggctctatgcttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 attgccttaggtctttttaaatagtgtattattatcgttggggctggctctatgcttgaa 512
Query: 61 aaccagtttatttataacctgttgtaagtgctatattctgtttgcagttaggaaatgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aaccagtttatttataacctgttgtaagtgctatattctgtttgcagttaggaaatgcag 452
Query: 121 aattcacagtgatctcctagcttgtaagcaaactgagatgcactatcccttttctattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aattcacagtgatctcctagcttgtaagcaaactgagatgcactatcccttttctattaa 392
Query: 181 gaatgagttgatgtgtcaggaaacaaggctagcaaagtggatttgatatccctttccttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gaatgagttgatgtgtcaggaaacaaggctagcaaagtggatttgatatccctttccttg 332
Query: 241 tgtgtcttatcttattgttttggtggttaatatggtgataattgaaagtcaagttgaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgtgtcttatcttattgttttggtggttaatatggtgataattgaaagtcaagttgaaat 272
Query: 301 tcaaatattaatatttctgatttgttgagctttgaattatgccaccatgcttatataaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tcaaatattaatatttctgatttgttgagctttgaattatgccaccatgcttatataaaa 212
Query: 361 acgaaggtggc 371
|||||||||||
Sbjct: 211 acgaaggtggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
