Query= MSMg01no468_g02.b1 MSMg01no468_g02.b1 CHROMAT_FILE:
MSMg01no468_g02.b1 PHD_FILE: MSMg01no468_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:34 2005
(153 letters)
>mm_chr4_107559870_107560421
Length = 552
Score = 261 bits (135), Expect = 1e-74
Identities = 147/151 (97%), Gaps = 1/151 (0%)
Strand = Plus / Plus
Query: 1 tctgtgggagacttgacaaagcaaagaaaaaaacaaacctaagcaactaagaactgccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtgggagacttgacaaagcaaagaaaaaaacaaacctaagcaactaagaactgccat 260
Query: 61 ttacaggaaatgatggggaaaggtttaaaaattcagtgagggccaaggagatggttctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacaggaaatgatggggaaaggtttaaaaattcagtgagggccaaggagatggttctgg 320
Query: 121 caggaaaagcttcgactgcgtaaacttgacc 151
|||||||||||| | ||| |||||||||||
Sbjct: 321 caggaaaagctttaa-tgcataaacttgacc 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 552
Length adjustment: 8
Effective length of query: 145
Effective length of database: 544
Effective search space: 78880
Effective search space used: 78880
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no468_g02.g1 MSMg01no468_g02.g1 CHROMAT_FILE:
MSMg01no468_g02.g1 PHD_FILE: MSMg01no468_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:35 2005
(284 letters)
>mm_chr4_107750726_107751410
Length = 685
Score = 518 bits (268), Expect = e-151
Identities = 281/286 (98%), Gaps = 3/286 (1%)
Strand = Plus / Minus
Query: 1 agccttgtgtgcagcttccctgagctctctcacttgctaatcag--gtactctctgatgt 58
||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 328 agccttgtgtgcagcttccctgagctctctc-cttgctaatcaggtgtactctctgatgt 270
Query: 59 gactagcactgtatacatgccttcagtggtggtgctaggagaggagcattgtgggacacg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gactagcactgtatacatgccttcagtggtggtgctaggagaggagcattgtgggacacg 210
Query: 119 aacacattgtgtaatgtgtagtgttctctacaccattttgtgttcccaactggtcacaac 178
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 209 aacacattgtgtaatgtgtagtgttgtctacaccattttgtgttcccaactggtcacaac 150
Query: 179 catgcacctgcccaggagcgatctcagatctttggataaaagacacacacccacattagc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 catgcacctgcccaggagcgatctcagatctttggataaaagacacacacccacattagc 90
Query: 239 ttatttttaaactgtcttactgggtctgtggctgggctcttctaag 284
|||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 89 ttatttttaaactggcttactgggtctgtggctgggctcttctaag 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
