CCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATATGATGTCTATGGGAATTTTATATATTTACAGAGGAAAAAT
CTTGGCCTGATATTTTGAACACTTCATAATTCCTGTTCTGAAATGATATT
TATAAAATATATATTTCTTTCATTATGTGTTTGTAAAAATTAGAGTTTAA
AGAAATATACTTAATGCATAGTTTTAAACTAATGTAACATGATTTTTCTT
TGCAAAACAGCCTGGAGATGTATTAATATTTAAAAATTAAAATCTGTTTT
CTCCTGTCCTGTCTTCTGTCTGTTAATTTTCTCTAAATTAAAACATCCCT
TATTTGAAGGAGGGGTTTGCTCATGAAACTTCAGAGGTGAACAGAAGTCT
GCTTTTATATGACTGCAAAAACAGAAACTGGGAAGGTGTTCAAAAACGCC
TTACTAGCTTGGCTAGTAGACTTTGACCAACCAAGATACAAAGGAGAACA
TGATACATTTTGTAATGCAGTGGCATGATGCGGTGGGAAGAGGGTGCCTC
ANCATGTCCTTGCTGAACCACTCTCCATTCCTCCTGATGTATCAGCCACA
TGACCTTGTGTCCTATTATAAATGTAATTTACTCGCGACACATTACACAC
TGTTTTCACACCTTTTATTTTTATCTTTCCTCTATTTCTCACTTTCCTCC
CTTTCCCCCTTCCTCTCTTTTTTCTCTCCCTTAATTCTTCCCTTCCTTCA
CTCTGCCCCTCTTCTTCC

CCCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCCAGGAAAGGGAGAATCTAAGT
TCAAGTTTTATTGGTGGTATTTATGTATTGTTTATTTGTTTGTTGCTTAT
TTTTTTTTTGAGACAGGGTCTCACTGTTTTTTCAAAACTGCCTCAAAACT
CACTATATTGACAAGAATTGCATCAAACTTAAAGCAATCCTCCTGCCTCT
GCACATGGCTATTTTCCGTTTTGTTTTGTCTTGTTTTGTTTTGCTTTGTT
TTGTTCGGCCGCCCCCCCCTCCCTTTTTTTCTCCCTCCCTGCTCCCCTAC
CTGCCCTCCGCCCTTACTCCGCCTTCACGATCCTAAACCGGTTCACCTTA
AAGCCTATCATCACATCACGCCCCCCCACACCCGCCCCTGCCCCTCCCCC
CCAATCCCCACACCACCACCCCCCCCCTCCTTTCCCCCCCCCCTATCCCC
CTCCCACCTGCCATCATATCCCTTATCTCCCCACCTCCTTACCCTCCCCT
TAACATCCCCCATCCCTTCCCCCCCCCAACCTTCTTCACTCAAACAGCAC
TTCTTCCCCCCCTCCCTTCTATTCATCCCCACCCCCCCACTTCCCCCTTT
TCCGTATATTTACCCCGCCTTTATTTTCCCCTTTCCCCACTTCCCCAATT
CCCCCCCCTCCTTTTCCTTCCCCCCCCCCTCGCCCCTTACTTTCCTCTCC
CCCCACTCCTCCCCCTCTATTTTTTATCCGCATCTTCCCCGCCCCCCCCT
ATTATTCCCCCCTCCCTCC

Query= MSMg01no469_l03.b1 MSMg01no469_l03.b1 CHROMAT_FILE:
MSMg01no469_l03.b1 PHD_FILE: MSMg01no469_l03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:22 2005
         (476 letters)



>mm_chr4_74051333_74052208
          Length = 876

 Score =  859 bits (444), Expect = 0.0
 Identities = 468/476 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattttatatatttacagaggaaaaatcttggcctgatattttgaacacttcataattcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattttatatatttacagaggaaaaatcttggcctgatattttgaacacttcataattcc 260

                                                                       
Query: 61  tgttctgaaatgatatttataaaatatatatttctttcattatgtgtttgtaaaaattag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttctgaaatgatatttataaaatatatatttctttcattatgtgtttgtaaaaattag 320

                                                                       
Query: 121 agtttaaagaaatatacttaatgcatagttttaaactaatgtaacatgatttttctttgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtttaaagaaatatacttaatgcatagttttaaactaatgtaacatgatttttctttgc 380

                                                                       
Query: 181 aaaacagcctggagatgtattaatatttaaaaattaaaatctgttttctcctgtcctgtc 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 aaaacagcctggagatgtattaatatttaaaaattaaaatctgttttctcctgtcccgtc 440

                                                                       
Query: 241 ttctgtctgttaattttctctaaattaaaacatcccttatttgaaggaggggtttgctca 300
           |||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 441 ttctgtctgtcaattttctctaaattaaaacaccccttatttgaaggagggggttgctca 500

                                                                       
Query: 301 tgaaacttcagaggtgaacagaagtctgcttttatatgactgcaaaaacagaaactggga 360
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 tgaaacttcagaggtgaacagaagtctgcttttacatgactgcaaaaacagaaactggga 560

                                                                       
Query: 361 aggtgttcaaaaacgccttactagcttggctagtagactttgaccaaccaagatacaaag 420
           |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 aggtgttcaaaaaccccttactagcttggcaagtagactttgaccaaccaagatacaaag 620

                                                                   
Query: 421 gagaacatgatacattttgtaatgcagtggcatgatgcggtgggaagagggtgcct 476
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 gagaacatgatacattttgtaatgcagtggcatgatgcggtgggaagggggtgcct 676


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space:   403556
Effective search space used:   403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)