Query= MSMg01no472_b17.b1 MSMg01no472_b17.b1 CHROMAT_FILE:
MSMg01no472_b17.b1 PHD_FILE: MSMg01no472_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:37 2005
(158 letters)
>mm_chr4_94310759_94311310
Length = 552
Score = 267 bits (138), Expect = 2e-76
Identities = 149/156 (95%), Gaps = 6/156 (3%)
Strand = Plus / Minus
Query: 1 tgtgtgacaaagactacagaggatgtctacatgaaaggcagaagtaaacagccgtgggct 60
||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 350 tgtgtgacaaagactacagaggatgtctacatgaaag------gtaaacagccgtgggct 297
Query: 61 cctcagtccacatctctagactaagcacaggaactagctccagcagaggctttttatgca 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 296 cctcagtccacatctctagactaagcacaggaaccagctccagcagaggctttttatgca 237
Query: 121 gctgacacggagggaatacttactgtgcacctacta 156
||||||||||||||||||||||||||||||||||||
Sbjct: 236 gctgacacggagggaatacttactgtgcacctacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 552
Length adjustment: 8
Effective length of query: 150
Effective length of database: 544
Effective search space: 81600
Effective search space used: 81600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no472_b17.g1 MSMg01no472_b17.g1 CHROMAT_FILE:
MSMg01no472_b17.g1 PHD_FILE: MSMg01no472_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:37 2005
(284 letters)
>mm_chr4_94136656_94137339
Length = 684
Score = 518 bits (268), Expect = e-151
Identities = 280/284 (98%)
Strand = Plus / Plus
Query: 1 ttgtctatttaatgaaatggaagggggagtctaaagacggtaagtcccagaaccatggct 60
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 ttgtctatttaatgaaatgaaagggggagtctaaagacagtaagtcccagaaccatggct 260
Query: 61 aggtctatgacaaagctgtacctataccagggcccttgtcatacttcactgtcctctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtctatgacaaagctgtacctataccagggcccttgtcatacttcactgtcctctgcc 320
Query: 121 cacatgactgtcccattctctcatcatcaccaagccaatggttgttcccacatttatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacatgactgtcccattctctcatcatcaccaagccaatggttgttcccacatttatgga 380
Query: 181 gcaactttctgtgtcttaaaacacactttgaaacataaacacaatgttttttacatcaaa 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gcaactttctgtgtcttaaaacacactatgaaacataaacacaatgttttttacatcaaa 440
Query: 241 agctccctttgacttgaagatcttttgctgcatgctaacagaag 284
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 agctccctttgacttcaagatcttttgctgcatgctaacagaag 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
