Query= MSMg01no473_i21.b1 MSMg01no473_i21.b1 CHROMAT_FILE:
MSMg01no473_i21.b1 PHD_FILE: MSMg01no473_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:41 2005
(433 letters)
>mm_chr4_122712533_122713366
Length = 834
Score = 762 bits (394), Expect = 0.0
Identities = 421/430 (97%), Gaps = 1/430 (0%)
Strand = Plus / Plus
Query: 5 gaattcacagaggtctgcctactactactgggtttaaaggcatatgccaccacatctggc 64
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattcacagaggtctgcttactactactgggtttaaagacatatgccaccacatctggc 264
Query: 65 tcatttttgtgttttgagtcagggtctttctatgtggtcaaggctgacctaaacttgtga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcatttttgtgttttgagtcagggtctttctatgtggtcaaggctgacctaaacttgtga 324
Query: 125 tctttattcttttacttcttaagtgctaggattacagatgtgcactaaatgcctggcctc 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctttattcttttacttcttaaatgctaggattacagatgtgcactaaatgcctggcctc 384
Query: 185 agatatttctcactacttgttacgagaacttt-cccatggagatttgatgtaaaagactc 243
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 385 agatatttctcactacttgttacgagaacttttcccatggagatttgatgtgaaagactc 444
Query: 244 caacttttgttatcagtattttcttctacttggcacatatattgtaccaagaaggacaag 303
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 445 caacttttgttatcagtattttcttctacttggcacatagacagtaccaagaaggacaag 504
Query: 304 gcaggtgtctgagacaaactgtccagcagctgtctggtcttgtgtttggtgctgacaagc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcaggtgtctgagacaaactgtccagcagctgtctggtcttgtgtttggtgctgacaagc 564
Query: 364 tcctagttgccatcactgtcattgcctaggaatttggggctgttgctgtacaagctgagg 423
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 565 tcctagttgccatcactgtcattgcctaggaatttggggctgttgctgtacaggctgagg 624
Query: 424 gacagtcaca 433
||||||||||
Sbjct: 625 gacagtcaca 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 834
Length adjustment: 9
Effective length of query: 424
Effective length of database: 825
Effective search space: 349800
Effective search space used: 349800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_i21.g1 MSMg01no473_i21.g1 CHROMAT_FILE:
MSMg01no473_i21.g1 PHD_FILE: MSMg01no473_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:41 2005
(422 letters)
>mm_chr4_122937349_122938169
Length = 821
Score = 756 bits (391), Expect = 0.0
Identities = 414/425 (97%), Gaps = 7/425 (1%)
Strand = Plus / Minus
Query: 1 ttctccttcctacgcccccctcagtcattatcccacctcaaccacaccggtggacaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttctccttcctacgcccccctcagtcattatcccacctcaaccacaccggtggacaggct 562
Query: 61 accagtgctcaggtgacaagaattatgtaacctacttagtccctaacacagtcactggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accagtgctcaggtgacaagaattatgtaacctacttagtccctaacacagtcactggaa 502
Query: 121 gagatctcagagcccagttggctggtatcctgaagttctcactgtgggcagcctgagcca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gagatctcagagcccagttggctggtatcctgaagttctcactgtgggcagcctgagcta 442
Query: 181 ggcagggagctgtgttctcacgtgcaggagacacactgttctgaatctgggcatccttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcagggagctgtgttctcacgtgcaggagacacactgttctgaatctgggcatccttgg 382
Query: 241 ggctgatactg---tattatgggggattgaagaagttacatctatctgtaagggcttgca 297
||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctgatactgagaca----gggggattgaagaagttacatctatctgtaagggcttgca 326
Query: 298 tcagcctagagaaataaaaggaaaggcagcttcttgtagggctagacctttgcgggtgct 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcagcctagagaaataaaaggaaaggcagcttcttgtagggctagacctttgcgggtgct 266
Query: 358 gttggagatccaccagccagctcccccctcagcctgagacggagcctcacagctgcctct 417
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 265 gttggaaatccaccagccagctcccccctcagcctgagacagagcctcacagctgcctct 206
Query: 418 cctgc 422
|||||
Sbjct: 205 cctgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 821
Length adjustment: 9
Effective length of query: 413
Effective length of database: 812
Effective search space: 335356
Effective search space used: 335356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
