Query= MSMg01no473_m21.b1 MSMg01no473_m21.b1 CHROMAT_FILE:
MSMg01no473_m21.b1 PHD_FILE: MSMg01no473_m21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:02 2005
(447 letters)
>mm_chr4_97661716_97662567
Length = 852
Score = 772 bits (399), Expect = 0.0
Identities = 433/447 (96%), Gaps = 5/447 (1%)
Strand = Plus / Plus
Query: 6 gaattcttcatatttttcatacaaggaattattccagaaatcagaaatatcacaaatttc 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcttcatatttttaatacaaggaattattccagaaatcagaaatatcacaaatttc 265
Query: 66 tccaatgaatggcaaataatttagttatcaaacaacttgccatatgaaatatgtc----- 120
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tccaataaatggcaaataatttagttatcaaacaacttgccatatgaaatatgtcataat 325
Query: 121 ataaattatgctaaggttaaaatttggccttacttgaagccatagaagtaaacacctcca 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 326 ataaattatgctaaggttaaaatctggccttacttgaagccatagaagtaaacacctcca 385
Query: 181 tttaactccataaagacctgttttctgagatacccaaattgagtacagaaacagctattg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tttaactccataaagacctgttttctgagatacccaaattgagtacagaaacagctatta 445
Query: 241 ctatgtcagtaataacatagtaatttacatgcggcaatagaatcccactaagtaaggcta 300
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 446 ctatgtcagtaataatatagtaatttacatgcggcaatagaagcccactaagtaaggcta 505
Query: 301 tctaagtcattgaacaaatagggcatagatagaagggagttgtgctgggccttctgacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tctaagtcattgaacaaatagggcatagatagaagggagttgtgctgggccttctgacga 565
Query: 361 tccaagttcgtaagctacaacaatgacattctggattattgacagagttcagagatgata 420
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 566 tccaagttcgtaagctacaacaatgacattctggattattgatagagttcagagatgatg 625
Query: 421 tcaatgaagtgggcagtcaacttacat 447
||||||||||| |||||||||||||||
Sbjct: 626 tcaatgaagtgcgcagtcaacttacat 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 852
Length adjustment: 10
Effective length of query: 437
Effective length of database: 842
Effective search space: 367954
Effective search space used: 367954
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_m21.g1 MSMg01no473_m21.g1 CHROMAT_FILE:
MSMg01no473_m21.g1 PHD_FILE: MSMg01no473_m21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:02 2005
(424 letters)
>mm_chr4_97800047_97800870
Length = 824
Score = 804 bits (416), Expect = 0.0
Identities = 422/424 (99%)
Strand = Plus / Minus
Query: 1 ctggcctgtgaatggctctcagatctctgtctggcagtatggtgtctcctgttccccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ctggcctgtgaatggctctcagatctctgtctggcagtatggtgtctcctgttccccagg 439
Query: 61 ctcaggccatgatgctttgaactctttggtccacaccagaagctgaacagtggttccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctcaggccatgatgctttgaactctttggtccacaccagaagctgaacagtggttccaca 379
Query: 121 tgatgtaggacttgcagccttcaattctctgagtttaaaatatctttatgagtacctagc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgatgtaggacttgcagcctccaattctctgagtttaaaatatctttatgagtacctagc 319
Query: 181 ttctgaaattttgatacagtaacagttgttggaccaatctaacaacatttcaaaattcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttctgaaattttgatacagtaacagttgttggaccaatctaacaacatttcaaaattcag 259
Query: 241 ataactttaaagatacagtttattatgaagcatgcagtagccttcaaatctctatcttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ataactttaaagatacagtttattatgaagcatgcagtagccttcaaatctctatcttct 199
Query: 301 gcctttgtttcctgagtaatgagattatagacatgtaccactatgcttagctttaaatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gcctttgtttcctgagtaatgagattatagacatgtaccactatgcttagctttaaatat 139
Query: 361 gtgtttcttgtctctaaaaggaaaagcatttcttgactcttgtgatggcctgaatcattt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 138 gtgtttcttgtctctaaaaggaaaagcatttcttgactcttgtgatggcctgaatcatgt 79
Query: 421 tccc 424
||||
Sbjct: 78 tccc 75
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
