Query= MSMg01no474_a13.b1 MSMg01no474_a13.b1 CHROMAT_FILE:
MSMg01no474_a13.b1 PHD_FILE: MSMg01no474_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:20 2005
(187 letters)
>mm_chr4_136450881_136451467
Length = 587
Score = 331 bits (171), Expect = 2e-95
Identities = 183/191 (95%), Gaps = 8/191 (4%)
Strand = Plus / Minus
Query: 1 tgcagttgaaatcaggctagctgaccaataccctcccagtcttcccagttatccttggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgcagttgaaatcaggctagctgaccaataccctcccagtcttcccagttatccttggac 328
Query: 61 aaaaccacacaggtgcttctgcagcctagctcagagagggcaaacaagtggctctctcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaaaccacacaggtgcttctgcagcctagctcagagagggcaaacaagtggctctctcgg 268
Query: 121 a----cttttagcagtctttcccagagctgaatttcctgagcggttggtttccaggaaga 176
| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acaccc----agcagtctttcccagagctgaatttcctgagcggttggtttccaggaaga 212
Query: 177 catggagagtg 187
|||||||||||
Sbjct: 211 catggagagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no474_a13.g1 MSMg01no474_a13.g1 CHROMAT_FILE:
MSMg01no474_a13.g1 PHD_FILE: MSMg01no474_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:20 2005
(270 letters)
>mm_chr4_136253394_136254063
Length = 670
Score = 522 bits (270), Expect = e-153
Identities = 270/270 (100%)
Strand = Plus / Plus
Query: 1 ggagtgggtgggctctgcttagtaccaagcccagcacaactccctatgagcatcagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggagtgggtgggctctgcttagtaccaagcccagcacaactccctatgagcatcagaaaa 260
Query: 61 cagcccctctcaggcctgcctctcctgcttgcttcaggacacaggttggcaatgtaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcccctctcaggcctgcctctcctgcttgcttcaggacacaggttggcaatgtaacca 320
Query: 121 agctaatcattggccactgtggctcatgctatcctgaccaggccctgtaggaccacaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctaatcattggccactgtggctcatgctatcctgaccaggccctgtaggaccacaagg 380
Query: 181 ggagaaaggacttcatcacaaacaaccaggcttcggaagctccagtgacagcgcaatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagaaaggacttcatcacaaacaaccaggcttcggaagctccagtgacagcgcaatcct 440
Query: 241 atggtagagatggggtagaggtgtgtgtgt 270
||||||||||||||||||||||||||||||
Sbjct: 441 atggtagagatggggtagaggtgtgtgtgt 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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