Query= MSMg01no474_c17.b1 MSMg01no474_c17.b1 CHROMAT_FILE:
MSMg01no474_c17.b1 PHD_FILE: MSMg01no474_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:31 2005
(244 letters)
>mm_chr4_97481786_97482429
Length = 644
Score = 232 bits (120), Expect = 1e-65
Identities = 135/140 (96%)
Strand = Plus / Plus
Query: 105 caaagaggaattcttaatctaacttgtttggaagcatgaatgtactcgatagtatcttgg 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 caaagaggaattcttaatctaacttgtttggaagcatgaatgtactcgatagtatcttgg 364
Query: 165 taagatgaaatgcttaccacctagacctcagaagtcagaggtgacatggaacgagtttgg 224
||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 365 taagaagaaatgtttaccacctagacctcagaagtcagaggtgacatggaatgagtttgg 424
Query: 225 attttgcttccttcccactg 244
| |||||||||||| |||||
Sbjct: 425 actttgcttccttcacactg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no474_c17.g1 MSMg01no474_c17.g1 CHROMAT_FILE:
MSMg01no474_c17.g1 PHD_FILE: MSMg01no474_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:31 2005
(611 letters)
>mm_chr4_97630685_97631696
Length = 1012
Score = 1145 bits (592), Expect = 0.0
Identities = 607/612 (99%), Gaps = 1/612 (0%)
Strand = Plus / Minus
Query: 1 acacagcctattgtacttagagaacttgaacacctggtatataaaatgccctcgaggaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 acacagcctattgtacttagagaacttgaacacctggtatataaaatgccctcgaggaat 753
Query: 61 gtgtgctatgatcataaaaacaaaaatgattatttttgcattatttactcctaaaccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gtgtgctatgatcataaaaacaaaaatgattatttttgcattatttactcctaaaccctt 693
Query: 121 gaagaattttatcctatttcctttaatactgctttccttaaatctgtgacattattcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gaagaattttatcctatttcctttaatactgctttccttaaatctgtgacattattcatt 633
Query: 181 tttaatgttaaaagggtcaactctatgctaatctaacatcttcagacaagcttatttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tttaatgttaaaagggtcaactctatgctaatctaacatcttcagacaagcttatttttc 573
Query: 241 aatctttgtaaagtcgtcctgagaaactcactctttaaacaaagccttcagatttagcag 300
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aatctaagtaaagtcgtcctgagaaactcactctttaaacaaagccttcagatttagcag 513
Query: 301 ttcttattgaagcatggagtcctctgcagtccagcttacctgaactgtc-tttttttgac 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 512 ttcttattgaagcatggagtcctctgcagtccagcttacctgaactgtcttttttttgac 453
Query: 360 tccacctctgaaagtggaattttccagtactctagtatttgacaattgttctatactcac 419
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 452 tccacctctgaaagtggaattttccagtgctctagtatttgacaattgttctatactcac 393
Query: 420 tgtctttcatgaggcaaatagtctgctaatagcaagatgctgtgaaaaaatgcactttgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgtctttcatgaggcaaatagtctgctaatagcaagatgctgtgaaaaaatgcactttgg 333
Query: 480 cttttctttcaacagtgactcacataaggccccagtggtggattcagttgataccccagt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cttttctttcaacagtgactcacataaggccccagtggtggattcagttgataccccagt 273
Query: 540 gattaaacttctatgcttactttcataggttgaatgactctcaaccatctttactgcacc 599
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 272 gattaaacttctatgcttactttcataggttgagtgactctcaaccatctttactgcacc 213
Query: 600 tattgacagcac 611
||||||||||||
Sbjct: 212 tattgacagcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1012
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1002
Effective search space: 602202
Effective search space used: 602202
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
