Query= MSMg01no475_o02.b1 MSMg01no475_o02.b1 CHROMAT_FILE:
MSMg01no475_o02.b1 PHD_FILE: MSMg01no475_o02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:48 2005
(498 letters)
>mm_chr4_64142020_64142917
Length = 898
Score = 948 bits (490), Expect = 0.0
Identities = 496/498 (99%)
Strand = Plus / Plus
Query: 1 tcatgcattatgttttgagtgtacatattaatttgtaatactggacttcctaaataaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatgcattatgttttgagtgtacatattaatttgtaatactggacttcctaaataaatg 260
Query: 61 gcaatattacctatcaaaattttatatgaggccagcaagttgcctcagtgggtgcagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaatattacctatcaaaattttatatgaggccagcaagttgcctcagtgggtgcagatg 320
Query: 121 cttgctggttaacctgatgaactgaatttgatttaaagaaccaacatggtaaagaaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgctggttaacctgatgaactgaatttgatttaaagaaccaacatggtaaagaaaata 380
Query: 181 atcagctttcactgttcgttcaaaacaaacaaacaaacaacagaatcatagggcaacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcagctttcactgttcgttcaaaacaaacaaacaaacaacagaatcatagggcaacagt 440
Query: 241 agaatgaattgctataaacatgtttactaaaaacaataaaatgagcaaagagagacactt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaatgaagtgctataaacatgtttactaaaaacaataaaatgagcaaagagagacactt 500
Query: 301 ggtgaaaaacgaataaaaacacaaaaaaacttttaaatgttaattcttagatcaataata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtgaaaaacgaataaaaacacaaaaaaacttttaaatgttaattcttagatcaataata 560
Query: 361 cagaacatgtcacacatcacagcgtatggtttcctacccttaagactgatagcaatgagt 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagaacatgccacacatcacagcgtatggtttcctacccttaagactgatagcaatgagt 620
Query: 421 gaacagtggtgtctgatactgaaaaggatgcaggactagtgcatctctcactaatgctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaacagtggtgtctgatactgaaaaggatgcaggactagtgcatctctcactaatgctgg 680
Query: 481 tggaatatataatgttcc 498
||||||||||||||||||
Sbjct: 681 tggaatatataatgttcc 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_o02.g1 MSMg01no475_o02.g1 CHROMAT_FILE:
MSMg01no475_o02.g1 PHD_FILE: MSMg01no475_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:48 2005
(497 letters)
>mm_chr6_144341630_144342525
Length = 896
Score = 938 bits (485), Expect = 0.0
Identities = 494/497 (99%), Gaps = 1/497 (0%)
Strand = Plus / Plus
Query: 1 ctggagaaagcagctgagctgaatggaagctctgagcttccagtccccaaggcccacgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggagaaagcagctgagctgaatggaagctctgagcttccagtccccaaggcccacgcc 260
Query: 61 cgctaactgcctcagggcgagttaaactgtccctccttgatgagattttttagcttgctg 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgctaactgcctcagggcaagttaaactgtccctccttgatgagattttttagcttgctg 320
Query: 121 tgttaacctcacccttgcatgctgtattctgcgcggctgtggatagcagcaaagaggccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttaacctcacccttgcatgctgtattctgcgcggctgtggatagcagcaaagaggccc 380
Query: 181 tgattatgccttctcccactaaatgtgccatagccacttacaaacccactttgctgctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgattatgccttctcccactaaatgtgccatagccacttacaaacccactttgctgctat 440
Query: 241 tcttattcttgaggtttgtttatttgctttttaaaatacattgcattgtcttactttaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttattcttgaggtttgtttatttgctttttaaaatacattgcattgtcttactttaaa 500
Query: 301 aaaaaaaaacttcaataaaaataattgcaaggaggtgggaaagagatcgatgacctgtaa 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaaaaaa-cttcaataaaaataattgcaaggaggtgggaaagagatcgatgacctgtaa 559
Query: 361 tttatatttcaatagagagactaaaataagctgcttttatttttgatttagcttagagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttatatttcaatagagagactaaaataagctgcttttatttttgatttagcttagagga 619
Query: 421 tggttttaaagccctctcttgacagctactgcaacccctatgctgaaggaagagctgctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggttttaaagccctctcttgacagctactgcaacccctatgctgaaggaagagctgctg 679
Query: 481 caggaaaacctcactct 497
| |||||||||||||||
Sbjct: 680 cgggaaaacctcactct 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 896
Length adjustment: 10
Effective length of query: 487
Effective length of database: 886
Effective search space: 431482
Effective search space used: 431482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
